RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 MYL2P10916 166 aa16.26■□□□□ 0.19
CLDND1-221ENST00000510541 HIST1H1TP22492 207 aaPredicted RBP16.26■□□□□ 0.19
CLDND1-221ENST00000510541 ATP5A1P25705 553 aaKnown RBP16.26■□□□□ 0.19
CLDND1-221ENST00000510541 RAB8AP61006 207 aa16.26■□□□□ 0.19
CLDND1-221ENST00000510541 BTN3A2P78410 334 aa16.26■□□□□ 0.19
CLDND1-221ENST00000510541 MAT1AQ00266 395 aaKnown RBP16.26■□□□□ 0.19
CLDND1-221ENST00000510541 ZNF844Q08AG5 666 aa16.26■□□□□ 0.19
CLDND1-221ENST00000510541 ZRSR2Q15696 482 aaKnown RBP16.26■□□□□ 0.19
CLDND1-221ENST00000510541 CPSF6Q16630 551 aaKnown RBP eCLIP16.26■□□□□ 0.19
CLDND1-221ENST00000510541 SYT16Q17RD7 645 aa16.26■□□□□ 0.19
CLDND1-221ENST00000510541 PLAG1Q6DJT9 500 aa16.26■□□□□ 0.19
CLDND1-221ENST00000510541 CPEB2Q7Z5Q1 589 aaKnown RBP16.26■□□□□ 0.19
CLDND1-221ENST00000510541 SCUBE1Q8IWY4 988 aa16.26■□□□□ 0.19
CLDND1-221ENST00000510541 OR4F6Q8NGB9 312 aa16.26■□□□□ 0.19
CLDND1-221ENST00000510541 OR2W6PQ8NHA6 318 aa16.26■□□□□ 0.19
CLDND1-221ENST00000510541 TRPC4APQ8TEL6 797 aa16.26■□□□□ 0.19
CLDND1-221ENST00000510541 METTL2AQ96IZ6 378 aaKnown RBP16.26■□□□□ 0.19
CLDND1-221ENST00000510541 NSUN5Q96P11 429 aaKnown RBP16.26■□□□□ 0.19
CLDND1-221ENST00000510541 SLC25A23Q9BV35 468 aa16.26■□□□□ 0.19
CLDND1-221ENST00000510541 NMRK1Q9NWW6 199 aa16.26■□□□□ 0.19
CLDND1-221ENST00000510541 GPR83Q9NYM4 423 aa16.26■□□□□ 0.19
CLDND1-221ENST00000510541 HCN3Q9P1Z3 774 aa16.26■□□□□ 0.19
CLDND1-221ENST00000510541 ZNF225Q9UK10 706 aa16.26■□□□□ 0.19
CLDND1-221ENST00000510541 TCRBV16S1A1N1A0A5B0 115 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 TLDC2A0PJX2 215 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 PSMD12O00232 456 aaPredicted RBP16.25■□□□□ 0.19
CLDND1-221ENST00000510541 C1QL1O75973 258 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 SUPT7LO94864 414 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 SERPINA7P05543 415 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 CPA3P15088 417 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 SERPINB5P36952 375 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 EFNA3P52797 238 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 IFT88Q13099 833 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 RUNX2Q13950 521 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 LY6DQ14210 128 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 PCOLCEQ15113 449 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 EXT1Q16394 746 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 AP5B1Q2VPB7 878 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 LIPMQ5VYY2 423 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 CPZQ66K79 652 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 OR4C11Q6IEV9 310 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 MRM1Q6IN84 353 aaKnown RBP16.25■□□□□ 0.19
CLDND1-221ENST00000510541 LETMD1Q6P1Q0 360 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 ZNF843Q8N446 348 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 GBP7Q8N8V2 638 aaPredicted RBP16.25■□□□□ 0.19
CLDND1-221ENST00000510541 ACOT4Q8N9L9 421 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 ARMC2Q8NEN0 867 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 OR5T3Q8NGG3 340 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 PPP4R1Q8TF05 950 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 PEX11GQ96HA9 241 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 F2RL3Q96RI0 385 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 LMF1Q96S06 567 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 SMC6Q96SB8 1091 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 ZNF717Q9BY31 904 aaPredicted RBP16.25■□□□□ 0.19
CLDND1-221ENST00000510541 SEMA4CQ9C0C4 833 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 LHPPQ9H008 270 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 GSTO2Q9H4Y5 243 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 ZNF552Q9H707 407 aaPredicted RBP16.25■□□□□ 0.19
CLDND1-221ENST00000510541 SIRT5Q9NXA8 310 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 AHSPQ9NZD4 102 aa16.25■□□□□ 0.19
CLDND1-221ENST00000510541 DOCK10Q96BY6 2186 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 BSNQ9UPA5 3926 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 NSG1A0A0A6YYJ2 146 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 EIF4E1BA6NMX2 242 aaKnown RBP16.24■□□□□ 0.19
CLDND1-221ENST00000510541 B8ZZF3 427 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 NPIPB8E9PQR5 432 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 TYROBPO43914 113 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 PRMT3O60678 531 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 KRT6AP02538 564 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 STATHP02808 62 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 KRT6BP04259 564 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 PCNAP12004 261 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 KRT6CP48668 564 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 PGDP52209 483 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 PLA2G16P53816 162 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 LIM2P55344 173 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 C19orf57Q0VDD7 668 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 CSTF3Q12996 717 aaKnown RBP16.24■□□□□ 0.19
CLDND1-221ENST00000510541 NSDHLQ15738 373 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 BEND6Q5SZJ8 279 aaPredicted RBP16.24■□□□□ 0.19
CLDND1-221ENST00000510541 ADNP2Q6IQ32 1131 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 H3F3CQ6NXT2 135 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 FRMD7Q6ZUT3 714 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 ANKRD37Q7Z713 158 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 KBTBD2Q8IY47 623 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 LGI4Q8N135 537 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 ARMC10Q8N2F6 343 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 FDCSPQ8NFU4 85 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 M1APQ8TC57 530 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 CCT6BQ92526 530 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 YIPF2Q9BWQ6 316 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 IQCGQ9H095 443 aaKnown RBP16.24■□□□□ 0.19
CLDND1-221ENST00000510541 RNF32Q9H0A6 362 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 COPS7BQ9H9Q2 264 aaPredicted RBP16.24■□□□□ 0.19
CLDND1-221ENST00000510541 SEMA4BQ9NPR2 832 aaPredicted RBP16.24■□□□□ 0.19
CLDND1-221ENST00000510541 PHF11Q9UIL8 331 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 CLDN16Q9Y5I7 305 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 SPACA6W5XKT8 324 aa16.24■□□□□ 0.19
CLDND1-221ENST00000510541 PLPP1O14494 284 aa16.23■□□□□ 0.19
CLDND1-221ENST00000510541 CTIFO43310 598 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms