RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 RSL1D1O76021 490 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 OR6B1O95007 311 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 OR2C1O95371 312 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 PGK1P00558 417 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 F10P00742 488 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 FCER2P06734 321 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 SRPRAP08240 638 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 TMEM191BP0C7N4 346 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 SLC35E2BP0CK96 405 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 SLC35E2P0CK97 266 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 GIMD1P0DJR0 217 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 SAGP10523 405 aaPredicted RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 DBTP11182 482 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 PSKH1P11801 424 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 TYRP14679 529 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 RPA2P15927 270 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF8P17098 575 aaPredicted RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 TCP1P17987 556 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 XRCC1P18887 633 aaPredicted RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 TCEA1P23193 301 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 F8A1P23610 371 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 CYP2F1P24903 491 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 S100PP25815 95 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 CD27P26842 260 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 DCTDP32321 178 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 MC5RP33032 325 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 SLC1A2P43004 574 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 MAGEA2P43356 314 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 KCNJ3P48549 501 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 PGDP52209 483 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 MAP2K6P52564 334 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 RAD23BP54727 409 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 CDH8P55286 799 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 NRG3P56975 720 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 ST8SIA6P61647 398 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 RPL23AP62750 156 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 RPS15P62841 145 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 ILF3Q12906 894 aaKnown RBP eCLIP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 BAMBIQ13145 260 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 ALKBH1Q13686 389 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 ITGA9Q13797 1035 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 PDK3Q15120 406 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 KCNJ8Q15842 424 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 TAZQ16635 292 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 TRIM16LQ309B1 348 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 TMEM177Q53S58 311 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 Q5PR19 223 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 PDSS1Q5T2R2 415 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 LIPJQ5W064 366 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 PLCXD3Q63HM9 321 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 SLC9A4Q6AI14 798 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 NADSYN1Q6IA69 706 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 ELP2Q6IA86 826 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 FSTL4Q6MZW2 842 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 C11orf87Q6NUJ2 197 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 ZFP1Q6P2D0 407 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 KLHL35Q6PF15 583 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 NHLRC1Q6VVB1 395 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 USP53Q70EK8 1073 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 PGAP1Q75T13 922 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 SLC35D2Q76EJ3 337 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 CHST9Q7L1S5 443 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 KCNK18Q7Z418 384 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 GDF7Q7Z4P5 450 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 PATL1Q86TB9 770 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 SERPINA12Q8IW75 414 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 KLHL7Q8IXQ5 586 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 ZBED8Q8IZ13 594 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 CLYBLQ8N0X4 340 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 C1orf52Q8N6N3 182 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 NECAB1Q8N987 351 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 TMEM35BQ8NCS4 154 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 CCNYQ8ND76 341 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 OR2D3Q8NGH3 330 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 OR4A15Q8NGL6 344 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 WDR48Q8TAF3 677 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 NANPQ8TBE9 248 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 GRAPLQ8TC17 118 aaPredicted RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 RNASE8Q8TDE3 154 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 BORCS5Q969J3 196 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 PTCD3Q96EY7 689 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 MARS2Q96GW9 593 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF385AQ96PM9 386 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 TEFMQ96QE5 360 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 TRIB1Q96RU8 372 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 C12orf57Q99622 126 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 HSD17B14Q9BPX1 270 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 FAM110AQ9BQ89 295 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF717Q9BY31 904 aaPredicted RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 PRRG3Q9BZD7 231 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 SLC19A3Q9BZV2 496 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 FOXP1Q9H334 677 aaPredicted RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 GOLPH3Q9H4A6 298 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 GPN1Q9HCN4 374 aaPredicted RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 ZC4H2Q9NQZ6 224 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 PNPOQ9NVS9 261 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 TAS2R1Q9NYW7 299 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 COL20A1Q9P218 1284 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 LPAR3Q9UBY5 353 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms