RNA–Protein interactions for RNA: ENST00000509259.5

CAST-225, Transcript of calpastatin, human

TSL 4

Gene CAST, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-225	ENST00000509259	DOLPP1	Q86YN1	238 aa		7.69	□□□□□ -1.18
CAST-225	ENST00000509259	UBL4B	Q8N7F7	174 aa		7.69	□□□□□ -1.18
CAST-225	ENST00000509259	SYT8	Q8NBV8	401 aa		7.69	□□□□□ -1.18
CAST-225	ENST00000509259	TMEM125	Q96AQ2	219 aa		7.69	□□□□□ -1.18
CAST-225	ENST00000509259	FAM136A	Q96C01	138 aa		7.69	□□□□□ -1.18
CAST-225	ENST00000509259	SCMH1	Q96GD3	660 aa		7.69	□□□□□ -1.18
CAST-225	ENST00000509259	OR2A5	Q96R48	311 aa		7.69	□□□□□ -1.18
CAST-225	ENST00000509259	ZNF559	Q9BR84	538 aa		7.69	□□□□□ -1.18
CAST-225	ENST00000509259	TRIM51	Q9BSJ1	452 aa		7.69	□□□□□ -1.18
CAST-225	ENST00000509259	LRFN1	Q9P244	771 aa		7.69	□□□□□ -1.18
CAST-225	ENST00000509259	MARCH4	Q9P2E8	410 aa	Predicted RBP	7.69	□□□□□ -1.18
CAST-225	ENST00000509259	IGKV1-8	A0A0C4DH67	115 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	USP27X	A6NNY8	438 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	ARHGEF33	A8MVX0	844 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259		H0YIG0	161 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	NDC80	O14777	642 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	HAT1	O14929	419 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	P2RX6	O15547	441 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	CDC40	O60508	579 aa	Known RBP eCLIP	7.68	□□□□□ -1.18
CAST-225	ENST00000509259	CDC123	O75794	336 aa	Predicted RBP	7.68	□□□□□ -1.18
CAST-225	ENST00000509259	ZWINT	O95229	277 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	SYF2	O95926	243 aa	Known RBP	7.68	□□□□□ -1.18
CAST-225	ENST00000509259	CAT	P04040	527 aa	Known RBP	7.68	□□□□□ -1.18
CAST-225	ENST00000509259	TPO	P07202	933 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	APRT	P07741	180 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	GLI4	P10075	376 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	IL1RN	P18510	177 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	PAM	P19021	973 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	CHRM3	P20309	590 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	FMO4	P31512	558 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	PTGS2	P35354	604 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	CYLC1	P35663	651 aa	Predicted RBP	7.68	□□□□□ -1.18
CAST-225	ENST00000509259	FDFT1	P37268	417 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	EFNA3	P52797	238 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	PNLIPRP1	P54315	467 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	PPP2R2A	P63151	447 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	ACVR1	Q04771	509 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	PRDX1	Q06830	199 aa	Known RBP	7.68	□□□□□ -1.18
CAST-225	ENST00000509259	MYBPH	Q13203	477 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	ARHGAP19	Q14CB8	494 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	ABRAXAS2	Q15018	415 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	NSDHL	Q15738	373 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	SFT2D3	Q587I9	215 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	SLC25A25	Q6KCM7	469 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	H3F3C	Q6NXT2	135 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	PAPD4	Q6PIY7	484 aa	Known RBP	7.68	□□□□□ -1.18
CAST-225	ENST00000509259	ANKRD37	Q7Z713	158 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	7.68	□□□□□ -1.18
CAST-225	ENST00000509259	PLD3	Q8IV08	490 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	SIAH3	Q8IW03	269 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	CCDC170	Q8IYT3	715 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	MPP5	Q8N3R9	675 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	ARHGEF39	Q8N4T4	335 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	CPSF7	Q8N684	471 aa	Known RBP	7.68	□□□□□ -1.18
CAST-225	ENST00000509259	PPFIBP2	Q8ND30	876 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	CHDH	Q8NE62	594 aa	Predicted RBP	7.68	□□□□□ -1.18
CAST-225	ENST00000509259	OR51Q1	Q8NH59	317 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	M1AP	Q8TC57	530 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	ASB5	Q8WWX0	329 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	PEX13	Q92968	403 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	RCC1L	Q96I51	464 aa	Known RBP	7.68	□□□□□ -1.18
CAST-225	ENST00000509259	DMRTA2	Q96SC8	542 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	LPAR4	Q99677	370 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	P2RY12	Q9H244	342 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	ANKH	Q9HCJ1	492 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	MMP25	Q9NPA2	562 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	KCNJ16	Q9NPI9	418 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	CHRAC1	Q9NRG0	131 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	PLA2G2D	Q9UNK4	145 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	PMF1-BGLAP	U3KQ54	211 aa		7.68	□□□□□ -1.18
CAST-225	ENST00000509259	NCOA6	Q14686	2063 aa	Predicted RBP	7.67	□□□□□ -1.18
CAST-225	ENST00000509259	CACNA1C	Q13936	2221 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	ANKRD34B	A5PLL1	514 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	NKX2-6	A6NCS4	301 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	OR2W5	A6NFC9	320 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259		E5RI56	91 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259		H3BMM5	538 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	SGK494	L7N484	410 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	MYO1C	O00159	1063 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	ADAM10	O14672	748 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	NME2P1	O60361	137 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	NIPSNAP2	O75323	286 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	NEURL1	O76050	574 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	MATN4	O95460	622 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	NSA2	O95478	260 aa	Known RBP	7.67	□□□□□ -1.18
CAST-225	ENST00000509259	ERG	P11308	486 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	RPS3	P23396	243 aa	Known RBP eCLIP	7.67	□□□□□ -1.18
CAST-225	ENST00000509259	ATP5D	P30049	168 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	CHRNB4	P30926	498 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	PTGER1	P34995	402 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	GRIA1	P42261	906 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	CYB561	P49447	251 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	SESN2	P58004	480 aa	Predicted RBP	7.67	□□□□□ -1.18
CAST-225	ENST00000509259	OR4D2	P58180	307 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	ABAT	P80404	500 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	KLHL38	Q2WGJ6	581 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	7.67	□□□□□ -1.18
CAST-225	ENST00000509259	PCID2	Q5JVF3	399 aa		7.67	□□□□□ -1.18
CAST-225	ENST00000509259	RNF187	Q5TA31	235 aa	Predicted RBP	7.67	□□□□□ -1.18
CAST-225	ENST00000509259	CES4A	Q5XG92	561 aa		7.67	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms