RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 LSM14AQ8ND56 463 aaKnown RBP8.64□□□□□ -1.03
NUP54-207ENST00000508583 WDR20Q8TBZ3 569 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 AGAP11Q8TF27 550 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 WBP1Q96G27 269 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 UBL7Q96S82 380 aaPredicted RBP8.64□□□□□ -1.03
NUP54-207ENST00000508583 ADNPQ9H2P0 1102 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 GSTO2Q9H4Y5 243 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 SOX17Q9H6I2 414 aaPredicted RBP8.64□□□□□ -1.03
NUP54-207ENST00000508583 ACSS2Q9NR19 701 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 HCN3Q9P1Z3 774 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 SLC17A7Q9P2U7 560 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 PHF11Q9UIL8 331 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 TUBD1Q9UJT1 453 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 ADAM29Q9UKF5 820 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 MKL2Q9ULH7 1088 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 LHX6Q9UPM6 363 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 MRPS2Q9Y399 296 aaKnown RBP8.64□□□□□ -1.03
NUP54-207ENST00000508583 SCN3AQ9NY46 2000 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 ZNF860A6NHJ4 632 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 CHST10O43529 356 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 PRMT3O60678 531 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 ALOX12BO75342 701 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 OR4F21O95013 312 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 BPGMP07738 259 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 C8orf89P0DMQ9 161 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 UROSP10746 265 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 ICAM2P13598 275 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 TSPAN8P19075 237 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 WT1P19544 449 aaPredicted RBP8.63□□□□□ -1.03
NUP54-207ENST00000508583 ATP5A1P25705 553 aaKnown RBP8.63□□□□□ -1.03
NUP54-207ENST00000508583 BUD31P41223 144 aaPredicted RBP8.63□□□□□ -1.03
NUP54-207ENST00000508583 RAB38P57729 211 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 MAGOHP61326 146 aaKnown RBP8.63□□□□□ -1.03
NUP54-207ENST00000508583 MAT1AQ00266 395 aaKnown RBP8.63□□□□□ -1.03
NUP54-207ENST00000508583 AIMP2Q13155 320 aaKnown RBP8.63□□□□□ -1.03
NUP54-207ENST00000508583 BIKQ13323 160 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 IL10RAQ13651 578 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 IMPG1Q17R60 797 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 DEFB109BQ30KR1 87 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 SPIN4Q56A73 249 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 SGO1Q5FBB7 561 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 VWA2Q5GFL6 755 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 HHATQ5VTY9 493 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 OR4C11Q6IEV9 310 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 QSOX2Q6ZRP7 698 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 PRSS41Q7RTY9 318 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 PDSS2Q86YH6 399 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 APLFQ8IW19 511 aaPredicted RBP8.63□□□□□ -1.03
NUP54-207ENST00000508583 TRIM42Q8IWZ5 723 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 ZNF595Q8IYB9 648 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 ADAMTS17Q8TE56 1095 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 RNF166Q96A37 237 aaPredicted RBP8.63□□□□□ -1.03
NUP54-207ENST00000508583 PEX11GQ96HA9 241 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 METTL2AQ96IZ6 378 aaKnown RBP8.63□□□□□ -1.03
NUP54-207ENST00000508583 F2RL3Q96RI0 385 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 CCT7Q99832 543 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 OR51B5Q9H339 312 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 KLHL31Q9H511 634 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 WDR41Q9HAD4 459 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 PRDM9Q9NQV7 894 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 RIC8BQ9NVN3 520 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 LYARQ9NX58 379 aaKnown RBP8.63□□□□□ -1.03
NUP54-207ENST00000508583 VPS29Q9UBQ0 182 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 DAPP1Q9UN19 280 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 SLC12A4Q9UP95 1085 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 MMACHCQ9Y4U1 282 aa8.63□□□□□ -1.03
NUP54-207ENST00000508583 A0A1W2PQ72 361 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 TMEM120BA0PK00 339 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 SERTM1A2A2V5 107 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 HMGB1P1B2RPK0 211 aaPredicted RBP8.62□□□□□ -1.03
NUP54-207ENST00000508583 TMEM114B3SHH9 223 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 MKRN2OSH3BPM6 223 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 MANBAO00462 879 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 PLPP1O14494 284 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 SERPINE1P05121 402 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 ALPPP05187 535 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 UMODP07911 640 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 CERS1P27544 350 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 ETV4P43268 484 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 GSTM5P46439 218 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 NEK2P51955 445 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 LIM2P55344 173 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 HSD17B7P56937 341 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 ATP1A4Q13733 1029 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 ABRAXAS2Q15018 415 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 NSDHLQ15738 373 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 TBR1Q16650 682 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 SYT16Q17RD7 645 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 RNF165Q6ZSG1 346 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 SHISA6Q6ZSJ9 500 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 RPS27LQ71UM5 84 aaKnown RBP8.62□□□□□ -1.03
NUP54-207ENST00000508583 CUZD1Q86UP6 607 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 PRSS58Q8IYP2 241 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 DTWD1Q8N5C7 304 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 ACOT4Q8N9L9 421 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 PLPP5Q8NEB5 264 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 RAB3IL1Q8TBN0 382 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 TLCD1Q96CP7 247 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 MTFMTQ96DP5 389 aaKnown RBP8.62□□□□□ -1.03
NUP54-207ENST00000508583 ATP6V1G3Q96LB4 118 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms