RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 FAM92AA1XBS5 289 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 C5orf60A6NFR6 353 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 DRGXA6NNA5 263 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 EEF1E1-BLOC1S5C9J1V9 151 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 SCDO00767 359 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 PRMT5O14744 637 aaPredicted RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 FANCGO15287 622 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 EEF1E1O43324 174 aaKnown RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 EIF4EBP3O60516 100 aaPredicted RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 SEMA3DO95025 777 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CRYABP02511 175 aaKnown RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 IFNA6P05013 189 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 IL6P05231 212 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 HLA-DQB2P05538 268 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CRYBA1P05813 215 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 RPSAP08865 295 aaKnown RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ARAFP10398 606 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 HOXA6P31267 233 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 MNDAP41218 407 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 NBL1P41271 181 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ATP5IP56385 69 aaPredicted RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 HSD17B7P56937 341 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 RAB4BP61018 213 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ABHD18Q0P651 414 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 EPS8Q12929 822 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 NAE1Q13564 534 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 DPYSL3Q14195 570 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 SLC35G1Q2M3R5 365 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 DEFB110Q30KQ9 67 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 AGKQ53H12 422 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM211Q6ICI0 200 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 NOXRED1Q6NXP6 359 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CERS6Q6ZMG9 384 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 TRIM73Q86UV7 250 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 PROSER1Q86XN7 944 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 C4orf33Q8N1A6 199 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 RIBC1Q8N443 379 aaPredicted RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 COX18Q8N8Q8 333 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ACTRT2Q8TDY3 377 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 SLC35F5Q8WV83 523 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 TTC9Q92623 222 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 LURAP1Q96LR2 239 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CNBD2Q96M20 576 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 NSMCE2Q96MF7 247 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 NDNQ99608 321 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF559Q9BR84 538 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 FNDC11Q9BVV2 318 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 TSPAN10Q9H1Z9 355 aaPredicted RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CXCL16Q9H2A7 254 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 PRTFDC1Q9NRG1 225 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 KCND1Q9NSA2 647 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 PIGVQ9NUD9 493 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM184CQ9NVA4 438 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 EPHA6Q9UF33 1036 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CORO2BQ9UQ03 480 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 GSTK1Q9Y2Q3 226 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 PCDHGB2Q9Y5G2 931 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF407Q9C0G0 2248 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 ISPDA4D126 451 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 IDSB3KWA1 339 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 MYL12BO14950 172 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 PAPSS1O43252 624 aaPredicted RBP2.84□□□□□ -1.96
NEDD4-208ENST00000508342 FZD6O60353 706 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 KCNH1O95259 989 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 LIFP15018 202 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 NAT1P18440 290 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 BTF3P20290 206 aaKnown RBP2.84□□□□□ -1.96
NEDD4-208ENST00000508342 CALB2P22676 271 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 DNASE1P24855 282 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 SRP14P37108 136 aaKnown RBP2.84□□□□□ -1.96
NEDD4-208ENST00000508342 GPR3P46089 330 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 MAPK12P53778 367 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 MLLT6P55198 1093 aaPredicted RBP2.84□□□□□ -1.96
NEDD4-208ENST00000508342 NOMO3P69849 1222 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 TCF15Q12870 199 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 CHAF1BQ13112 559 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 SMCO1Q147U7 214 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 HEPACAMQ14CZ8 416 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 AKIRIN2Q53H80 203 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 PYHIN1Q6K0P9 492 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 ZYG11AQ6WRX3 759 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 KYAT3Q6YP21 454 aaKnown RBP2.84□□□□□ -1.96
NEDD4-208ENST00000508342 NYAP1Q6ZVC0 841 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 SLC26A9Q7LBE3 791 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 FAM47BQ8NA70 645 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 OR2L5Q8NG80 312 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 PHF10Q8WUB8 498 aaKnown RBP2.84□□□□□ -1.96
NEDD4-208ENST00000508342 SPATA13Q96N96 652 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 IP6K3Q96PC2 410 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 EHD1Q9H4M9 534 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 SEC61A2Q9H9S3 476 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 NOD2Q9HC29 1040 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 DYNLRB1Q9NP97 96 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 SLCO3A1Q9UIG8 710 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 ATPIF1Q9UII2 106 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 DLGAP4Q9Y2H0 992 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 MRPS7Q9Y2R9 242 aaKnown RBP2.84□□□□□ -1.96
NEDD4-208ENST00000508342 ACTL7AQ9Y615 435 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 LNP1A1A4G5 178 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 PRSS44E7EML9 344 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms