RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 CCNDBP1O95273 360 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 ALPLP05186 524 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 CHRM5P08912 532 aaPredicted RBP11.61□□□□□ -0.55
LIN54-206ENST00000506560 CHRNB1P11230 501 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 ROR2Q01974 943 aaKnown RBP11.61□□□□□ -0.55
LIN54-206ENST00000506560 HSPB3Q12988 150 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 C1orf61Q13536 156 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 KRT80Q6KB66 452 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 ABRAXAS1Q6UWZ7 409 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 AMIGO1Q86WK6 493 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 LSRQ86X29 649 aaPredicted RBP11.61□□□□□ -0.55
LIN54-206ENST00000506560 ZDHHC21Q8IVQ6 265 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 ST13P4Q8IZP2 240 aaPredicted RBP11.61□□□□□ -0.55
LIN54-206ENST00000506560 STARD8Q92502 1023 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 OTUB1Q96FW1 271 aaPredicted RBP11.61□□□□□ -0.55
LIN54-206ENST00000506560 TAS2R9Q9NYW1 312 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 USP36Q9P275 1121 aaKnown RBP11.61□□□□□ -0.55
LIN54-206ENST00000506560 DNAJB9Q9UBS3 223 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 APOBEC3BQ9UH17 382 aaKnown RBP11.61□□□□□ -0.55
LIN54-206ENST00000506560 FAF1Q9UNN5 650 aaPredicted RBP11.61□□□□□ -0.55
LIN54-206ENST00000506560 GNGT2O14610 69 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 CAPN5O15484 640 aaPredicted RBP11.61□□□□□ -0.55
LIN54-206ENST00000506560 ERI3O43414 337 aaKnown RBP11.61□□□□□ -0.55
LIN54-206ENST00000506560 SH3BP5O60239 455 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 NME6O75414 186 aaPredicted RBP11.61□□□□□ -0.55
LIN54-206ENST00000506560 DDCP20711 480 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 CXCR2P25025 360 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 PIGAP37287 484 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 DCTP40126 519 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 YAP1P46937 504 aaKnown RBP11.61□□□□□ -0.55
LIN54-206ENST00000506560 PRRT3Q5FWE3 981 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 C10orf62Q5T681 223 aaPredicted RBP11.61□□□□□ -0.55
LIN54-206ENST00000506560 OLIG3Q7RTU3 272 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 PACRGLQ8N7B6 248 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 KCT2Q8NC54 265 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 OR52E4Q8NGH9 312 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 GOT1L1Q8NHS2 421 aaPredicted RBP11.61□□□□□ -0.55
LIN54-206ENST00000506560 RSPO3Q9BXY4 272 aaPredicted RBP11.61□□□□□ -0.55
LIN54-206ENST00000506560 GRIP2Q9C0E4 1043 aa11.61□□□□□ -0.55
LIN54-206ENST00000506560 ZNF282Q9UDV7 671 aaPredicted RBP11.61□□□□□ -0.55
LIN54-206ENST00000506560 A0A0C4DFX4 3053 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 WDR87Q6ZQQ6 2873 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 KLHL33A6NCF5 533 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 G3V2T6 193 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 MITFO75030 526 aaPredicted RBP11.6□□□□□ -0.55
LIN54-206ENST00000506560 TNFRSF21O75509 655 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 HTR1BP28222 390 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 SSR2P43308 183 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 CDK9P50750 372 aaKnown RBP11.6□□□□□ -0.55
LIN54-206ENST00000506560 HNRNPFP52597 415 aaKnown RBP11.6□□□□□ -0.55
LIN54-206ENST00000506560 PPP1CAP62136 330 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 DUSP2Q05923 314 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 FOXD4Q12950 439 aaPredicted RBP11.6□□□□□ -0.55
LIN54-206ENST00000506560 SMAD4Q13485 552 aaKnown RBP11.6□□□□□ -0.55
LIN54-206ENST00000506560 TSEN54Q7Z6J9 526 aaKnown RBP11.6□□□□□ -0.55
LIN54-206ENST00000506560 RAB42Q8N4Z0 105 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 DENND6BQ8NEG7 585 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 OR10G6Q8NH81 332 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 NFKBIDQ8NI38 313 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 ASB12Q8WXK4 309 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 PHF7Q9BWX1 381 aaPredicted RBP11.6□□□□□ -0.55
LIN54-206ENST00000506560 KIR3DX1Q9H7L2 352 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 ATAD3AQ9NVI7 634 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.6□□□□□ -0.55
LIN54-206ENST00000506560 DMDP11532 3685 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 PRAMEF25A6NGN4 478 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 PGRMC2O15173 223 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 DNAJB6O75190 326 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 SEMA3DO95025 777 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 FKBP9O95302 570 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 PVRP15151 417 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 POLR2CP19387 275 aaPredicted RBP11.6□□□□□ -0.55
LIN54-206ENST00000506560 MAGP20916 626 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 CERS1P27544 350 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 SHMT2P34897 504 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 OR1E2P47887 323 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 DAG1Q14118 895 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 GPR18Q14330 331 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 FBXO43Q4G163 708 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 OR4C11Q6IEV9 310 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 TNFAIP8L2Q6P589 184 aaPredicted RBP11.6□□□□□ -0.55
LIN54-206ENST00000506560 FKBP9P1Q75LS8 142 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 R3HCC1LQ7Z5L2 792 aaKnown RBP11.6□□□□□ -0.55
LIN54-206ENST00000506560 NUDT13Q86X67 352 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 FLVCR1-AS1Q8TAF5 88 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 RGMAQ96B86 450 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 CXorf40BQ96DE9 158 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 MS4A6EQ96DS6 147 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 FOXQ1Q9C009 403 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 ZNF696Q9H7X3 374 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 C1GALT1Q9NS00 363 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 TMEM74BQ9NUR3 256 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 AP3M1Q9Y2T2 418 aa11.6□□□□□ -0.55
LIN54-206ENST00000506560 A0A0A6YYD5 115 aa11.59□□□□□ -0.55
LIN54-206ENST00000506560 TRBC2A0A5B9 178 aa11.59□□□□□ -0.55
LIN54-206ENST00000506560 B4GAT1O43505 415 aa11.59□□□□□ -0.55
LIN54-206ENST00000506560 E2F6O75461 281 aa11.59□□□□□ -0.55
LIN54-206ENST00000506560 TNFAIP8O95379 198 aa11.59□□□□□ -0.55
LIN54-206ENST00000506560 APBB3O95704 486 aa11.59□□□□□ -0.55
LIN54-206ENST00000506560 SEMG1P04279 462 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms