RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 CASTP20810 708 aaKnown RBP2.81□□□□□ -1.96
RFC1-209ENST00000504974 MUTP22033 750 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 MMP12P39900 470 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 NPBWR1P48145 328 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 LEPRP48357 1165 aaKnown RBP2.81□□□□□ -1.96
RFC1-209ENST00000504974 XGP55808 180 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 HUNKP57058 714 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 YWHAHQ04917 246 aaPredicted RBP2.81□□□□□ -1.96
RFC1-209ENST00000504974 SGCGQ13326 291 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 CDO1Q16878 200 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 TWISTNBQ3B726 338 aaPredicted RBP2.81□□□□□ -1.96
RFC1-209ENST00000504974 ZNF542PQ5EBM4 170 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 FGD3Q5JSP0 725 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 ADAMTSL4-AS1Q5T5F5 129 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 SLC25A47Q6Q0C1 308 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 FCRLAQ7L513 359 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 TUSC5Q8IXB3 177 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 RCOR2Q8IZ40 523 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 DCLK2Q8N568 766 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 NKAIN3Q8N8D7 197 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 KIAA0895Q8NCT3 520 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 OR10G8Q8NGN5 311 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 NCOA7Q8NI08 942 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 RBM41Q96IZ5 413 aaKnown RBP2.81□□□□□ -1.96
RFC1-209ENST00000504974 PARK7Q99497 189 aaKnown RBP2.81□□□□□ -1.96
RFC1-209ENST00000504974 CDCA3Q99618 268 aaPredicted RBP2.81□□□□□ -1.96
RFC1-209ENST00000504974 SYT15Q9BQS2 421 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 DESI2Q9BSY9 194 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 TEX13AQ9BXU3 409 aaPredicted RBP2.81□□□□□ -1.96
RFC1-209ENST00000504974 LSG1Q9H089 658 aaKnown RBP2.81□□□□□ -1.96
RFC1-209ENST00000504974 COPS7BQ9H9Q2 264 aaPredicted RBP2.81□□□□□ -1.96
RFC1-209ENST00000504974 RAVER2Q9HCJ3 691 aaKnown RBP2.81□□□□□ -1.96
RFC1-209ENST00000504974 SPHK2Q9NRA0 654 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 RNF186Q9NXI6 227 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 KLHL8Q9P2G9 620 aaPredicted RBP2.81□□□□□ -1.96
RFC1-209ENST00000504974 NOL7Q9UMY1 257 aaKnown RBP2.81□□□□□ -1.96
RFC1-209ENST00000504974 NCKAP1Q9Y2A7 1128 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 TIAM2Q8IVF5 1701 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 ARFGEF2Q9Y6D5 1785 aa2.81□□□□□ -1.96
RFC1-209ENST00000504974 MKI67P46013 3256 aaKnown RBP2.81□□□□□ -1.96
RFC1-209ENST00000504974 GREB1LQ9C091 1923 aaPredicted RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 FER1L6Q2WGJ9 1857 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 ANKRD31Q8N7Z5 1873 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 NUP98P52948 1817 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 ANKRD36CQ5JPF3 1778 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 CARMIL3Q8ND23 1372 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 A0A0U1RQK1 487 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 A0A1W2PR80 420 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 ZNF320A2RRD8 509 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 A4D1N5 150 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 SLCO1B7G3V0H7 640 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 NR5A2O00482 541 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 IFIT3O14879 490 aaKnown RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 TEX28O15482 410 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 NXPH2O95156 264 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 SIX3O95343 332 aaPredicted RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 MOCS2O96007 188 aaPredicted RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 DLATP10515 647 aaKnown RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 GP1BBP13224 206 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 ZNF26P17031 533 aaPredicted RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 CEBPBP17676 345 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 ELAVL4P26378 380 aaKnown RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 PIK3R1P27986 724 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 CCND3P30281 292 aaPredicted RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 DUTP33316 252 aaKnown RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 OPRL1P41146 370 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 EPS15P42566 896 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 CDX1P47902 265 aaPredicted RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 RIPK4P57078 832 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 DCDC1P59894 354 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 CDH18Q13634 790 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 TAF7Q15545 349 aaPredicted RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 PTPN14Q15678 1187 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 HLA-BQ31612 363 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 SPOUT1Q5T280 376 aaKnown RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 ADAM5Q6NVV9 412 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 NOTUMQ6P988 496 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 USP50Q70EL3 339 aaPredicted RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 ANKRD33Q7Z3H0 272 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 NOTCH2NLQ7Z3S9 236 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 CREBRFQ8IUR6 639 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 SYCP3Q8IZU3 236 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 GPC2Q8N158 579 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 TMCO5AQ8N6Q1 288 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 ATAD1Q8NBU5 361 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 GDAP1Q8TB36 358 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 MAPK15Q8TD08 544 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 UBLCP1Q8WVY7 318 aaPredicted RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 NEDD4LQ96PU5 975 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 GPATCH1Q9BRR8 931 aaKnown RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 THUMPD2Q9BTF0 503 aaKnown RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 PI4K2AQ9BTU6 479 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 UTP14AQ9BVJ6 771 aaKnown RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 DPEP2Q9H4A9 486 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 RPF1Q9H9Y2 349 aaKnown RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 TBC1D13Q9NVG8 400 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 C2orf42Q9NWW7 574 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 HACD3Q9P035 362 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 NARFQ9UHQ1 456 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms