RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 SLC9B1Q4ZJI4 515 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 TMEM35AQ53FP2 167 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 CFAP157Q5JU67 520 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 FAM69BQ5VUD6 431 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 CPZQ66K79 652 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 TTC19Q6DKK2 380 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 OR4C11Q6IEV9 310 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 OGFOD2Q6N063 350 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 EPGNQ6UW88 154 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 FAM47EQ6ZV65 393 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 CHSY3Q70JA7 882 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 OVCH1Q7RTY7 1134 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 COMMD6Q7Z4G1 85 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ZC3H7AQ8IWR0 971 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 RIMKLAQ8IXN7 391 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 LRRC34Q8IZ02 419 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 MMP21Q8N119 569 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 CA13Q8N1Q1 262 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 GBP7Q8N8V2 638 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ZNF454Q8N9F8 522 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ACOT4Q8N9L9 421 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 GALNT6Q8NCL4 622 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 PROKR1Q8TCW9 393 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 AGR3Q8TD06 166 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 NUDT8Q8WV74 236 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 SELENOMQ8WWX9 145 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ATP6V1E2Q96A05 226 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 TM4SF18Q96CE8 201 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 SLC45A3Q96JT2 553 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 EGLN2Q96KS0 407 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ZNF578Q96N58 590 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 KCNC2Q96PR1 638 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 OR52B2Q96RD2 323 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 CSF3RQ99062 836 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 PAIP2Q9BPZ3 127 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 TBCDQ9BTW9 1192 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ULBP3Q9BZM4 244 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 CHST8Q9H2A9 424 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ELOVL6Q9H5J4 265 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 WDR55Q9H6Y2 383 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 SLC52A3Q9NQ40 469 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 TEX10Q9NXF1 929 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ASIC5Q9NY37 505 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 HEY2Q9UBP5 337 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 VPS29Q9UBQ0 182 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 CTSFQ9UBX1 484 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ADAM29Q9UKF5 820 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 SNX6Q9UNH7 406 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 SRPK3Q9UPE1 567 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 MAP4K5Q9Y4K4 846 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ATG4BQ9Y4P1 393 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 TNRC6AQ8NDV7 1962 aaKnown RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 A0A1W2PR48 441 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 ZNF860A6NHJ4 632 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 TCP11X1B4DZS4 312 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 FAM227AF5H4B4 570 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 PROM1O43490 865 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 SCN2BO60939 215 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 RDH16O75452 317 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 SKAP2O75563 359 aaPredicted RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 PRKRAO75569 313 aaKnown RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 ALBP02768 609 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 FURINP09958 794 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 LINC00032P0C843 101 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 LIPCP11150 499 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 PCNAP12004 261 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 ACPPP15309 386 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 SDC1P18827 310 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 EPHA3P29320 983 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 EIF2S3P41091 472 aaKnown RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 MRPL19P49406 292 aaKnown RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 GPR143P51810 404 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 PLA2G16P53816 162 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 SEC24CP53992 1094 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 DIO3P55073 304 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 C21orf58P58505 322 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 STXBP1P61764 594 aaKnown RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 PHC1P78364 1004 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 OLR1P78380 273 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 RHAGQ02094 409 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 DUSP2Q05923 314 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 ABHD18Q0P651 414 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 IFT88Q13099 833 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 PDE7AQ13946 482 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 HERC3Q15034 1050 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 NCF4Q15080 339 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 HIST2H2ACQ16777 129 aaPredicted RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 HSP90B2PQ58FF3 399 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 VWA2Q5GFL6 755 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 TOR1AIP1Q5JTV8 583 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 C1orf189Q5VU69 101 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 ATG16L1Q676U5 607 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 HIST2H2AA3Q6FI13 130 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 PRMT9Q6P2P2 845 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 PROSER1Q86XN7 944 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 MYLK4Q86YV6 388 aaPredicted RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 TMEM126BQ8IUX1 230 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 SCUBE1Q8IWY4 988 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 HOMEZQ8IX15 550 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 GPR135Q8IZ08 494 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms