RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 PCDH17O14917 1159 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 SLITRK5O94991 958 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 SLC16A8O95907 504 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 ADAP00813 363 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 OPN1SWP03999 348 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 COPZ1P61923 177 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 ILKQ13418 452 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 STARD3Q14849 445 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 NCF4Q15080 339 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 SF1Q15637 639 aaKnown RBP14.33□□□□□ -0.11
SNF8-203ENST00000504000 SYTL3Q4VX76 610 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 SOWAHCQ53LP3 525 aaPredicted RBP14.33□□□□□ -0.11
SNF8-203ENST00000504000 FAM71E1Q6IPT2 247 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 PTCHD4Q6ZW05 846 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 IKBIPQ70UQ0 350 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 TRIM69Q86WT6 500 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.33□□□□□ -0.11
SNF8-203ENST00000504000 HS6ST3Q8IZP7 471 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 OR9Q2Q8NGE9 314 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 MRPS31Q92665 395 aaKnown RBP14.33□□□□□ -0.11
SNF8-203ENST00000504000 PPCDCQ96CD2 204 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 MED8Q96G25 268 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 FOPNLQ96NB1 174 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 OR5M11Q96RB7 305 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 SNX18Q96RF0 628 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 PKP4Q99569 1192 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 OR2B2Q9GZK3 357 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 RNF167Q9H6Y7 350 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 RC3H2Q9HBD1 1191 aaKnown RBP14.33□□□□□ -0.11
SNF8-203ENST00000504000 NEK6Q9HC98 313 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 CFAP97Q9P2B7 532 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 GULP1Q9UBP9 304 aa14.33□□□□□ -0.11
SNF8-203ENST00000504000 TSPAN11A1L157 253 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 ATG13O75143 517 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 C6orf47O95873 294 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 ALDH1A1P00352 501 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 IFNW1P05000 195 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 HSMCR30P0CW71 290 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 CTSAP10619 480 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 TNFRSF1BP20333 461 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 HLA-FP30511 346 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 CSTF2P33240 577 aaKnown RBP eCLIP14.33□□□□□ -0.12
SNF8-203ENST00000504000 HTR3AP46098 478 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 PRLHRP49683 370 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 IFITM2Q01629 132 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 DMC1Q14565 340 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 MED22Q15528 200 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 SSX1Q16384 188 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 TSTQ16762 297 aaKnown RBP14.33□□□□□ -0.12
SNF8-203ENST00000504000 SLC5A12Q1EHB4 618 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 KLHL17Q6TDP4 642 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 ANGPTL8Q6UXH0 198 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.33□□□□□ -0.12
SNF8-203ENST00000504000 ZNF852Q6ZMS4 543 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 RAVER1Q8IY67 606 aaKnown RBP14.33□□□□□ -0.12
SNF8-203ENST00000504000 OR4K1Q8NGD4 311 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 BTN2A2Q8WVV5 523 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 EPHX3Q9H6B9 360 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 RNF186Q9NXI6 227 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 SEC14L4Q9UDX3 406 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 CD84Q9UIB8 345 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 WBP11Q9Y2W2 641 aaKnown RBP14.33□□□□□ -0.12
SNF8-203ENST00000504000 LSM2Q9Y333 95 aaKnown RBP14.33□□□□□ -0.12
SNF8-203ENST00000504000 ALPK3Q96L96 1907 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 PLXNA2O75051 1894 aa14.33□□□□□ -0.12
SNF8-203ENST00000504000 PRAMEF33A0A0G2JMD5 474 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 FAM172BPA6NC97 362 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 CAPN5O15484 640 aaPredicted RBP14.32□□□□□ -0.12
SNF8-203ENST00000504000 PRAMEF10O60809 474 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 CCNKO75909 580 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 KRT8P05787 483 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 CKMP06732 381 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 TRAPPC2P0DI81 140 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 TRAPPC2BP0DI82 140 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 DDX5P17844 614 aaKnown RBP14.32□□□□□ -0.12
SNF8-203ENST00000504000 ITGB7P26010 798 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 TNFSF8P32971 234 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 CRISP3P54108 245 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 SF3B4Q15427 424 aaKnown RBP eCLIP14.32□□□□□ -0.128e-9■■■■□ 21.6
SNF8-203ENST00000504000 LHX8Q68G74 356 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 TMC5Q6UXY8 1006 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 COMMD6Q7Z4G1 85 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 HSD11B1LQ7Z5J1 315 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 UBQLNLQ8IYU4 475 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 NATD1Q8N6N6 113 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 ZNF557Q8N988 423 aaPredicted RBP14.32□□□□□ -0.12
SNF8-203ENST00000504000 AQP11Q8NBQ7 271 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 OR6F1Q8NGZ6 308 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 APOBEC4Q8WW27 367 aaKnown RBP14.32□□□□□ -0.12
SNF8-203ENST00000504000 SCAMP4Q969E2 229 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 NEIL2Q969S2 332 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 ERLEC1Q96DZ1 483 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 PPP1R16AQ96I34 528 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 CEP19Q96LK0 163 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 OPALINQ96PE5 141 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 OR2A14Q96R47 310 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 WRAP53Q9BUR4 548 aaKnown RBP14.32□□□□□ -0.12
SNF8-203ENST00000504000 DMRT3Q9NQL9 472 aa14.32□□□□□ -0.12
SNF8-203ENST00000504000 TRBC2A0A5B9 178 aa14.31□□□□□ -0.12
SNF8-203ENST00000504000 MTX2O75431 263 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms