RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 ANKRD65E5RJM6 399 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 H3BQ06 376 aaPredicted RBP4.47□□□□□ -1.69
SSR3-209ENST00000498205 TRDMT1O14717 391 aaKnown RBP4.47□□□□□ -1.69
SSR3-209ENST00000498205 CHADO15335 359 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 MED7O43513 233 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 PCDH7O60245 1069 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 FAM189A1O60320 539 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 CTSVO60911 334 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 ZNF217O75362 1048 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 RB1P06400 928 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 RALAP11233 206 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 CALB2P22676 271 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 HRH2P25021 359 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 PTPN4P29074 926 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 LIG4P49917 911 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 GEMIN4P57678 1058 aaKnown RBP4.47□□□□□ -1.69
SSR3-209ENST00000498205 CDK16Q00536 496 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 PRKCEQ02156 737 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 NAB1Q13506 487 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 EMC2Q15006 297 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 KYNUQ16719 465 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 UGCGQ16739 394 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 HADHQ16836 314 aaKnown RBP4.47□□□□□ -1.69
SSR3-209ENST00000498205 DUOXA1Q1HG43 343 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 SHROOM1Q2M3G4 852 aaPredicted RBP4.47□□□□□ -1.69
SSR3-209ENST00000498205 KRTAP24-1Q3LI83 254 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 PLEKHS1Q5SXH7 462 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 ARHGEF16Q5VV41 709 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 PLA2G4FQ68DD2 849 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 SLC35E4Q6ICL7 350 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 MARK2Q7KZI7 788 aaKnown RBP4.47□□□□□ -1.69
SSR3-209ENST00000498205 PDIK1LQ8N165 341 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 WDTC1Q8N5D0 677 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 GBGT1Q8N5D6 347 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 SLC4A11Q8NBS3 891 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 MCUQ8NE86 351 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 TEKT4Q8WW24 435 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 TCP11Q8WWU5 503 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 ZNF606Q8WXB4 792 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 PRCCQ92733 491 aaPredicted RBP4.47□□□□□ -1.69
SSR3-209ENST00000498205 ZNF622Q969S3 477 aaKnown RBP eCLIP4.47□□□□□ -1.69
SSR3-209ENST00000498205 STAMBPL1Q96FJ0 436 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 CYTH2Q99418 400 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 PITPNM3Q9BZ71 974 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 TFB2MQ9H5Q4 396 aaKnown RBP4.47□□□□□ -1.69
SSR3-209ENST00000498205 FAM96AQ9H5X1 160 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 DCLRE1BQ9H816 532 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 RNPEPL1Q9HAU8 725 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 ZBTB20Q9HC78 741 aaPredicted RBP4.47□□□□□ -1.69
SSR3-209ENST00000498205 FGFR1OP2Q9NVK5 253 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 HOXC10Q9NYD6 342 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 FBXL17Q9UF56 701 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.47□□□□□ -1.69
SSR3-209ENST00000498205 SCN4AP35499 1836 aa4.46□□□□□ -1.69
SSR3-209ENST00000498205 IQANK1A0A1B0GTG1 560 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 PRR23AA6NEV1 266 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 A8MXQ7 604 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 PTGES3LE9PB15 166 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 TMEM178BH3BS89 294 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 K7ERI5 159 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 AP3D1O14617 1153 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 OGTO15294 1046 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 NDUFS4O43181 175 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 SH3BP5O60239 455 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 CCDC22O60826 627 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 ATP9AO75110 1047 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 PTP4A3O75365 173 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 BMP10O95393 424 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 ACSL3O95573 720 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 TFAP2AP05549 437 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 CLTBP09497 229 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 TROVE2P10155 538 aaKnown RBP eCLIP4.46□□□□□ -1.7
SSR3-209ENST00000498205 DLATP10515 647 aaKnown RBP4.46□□□□□ -1.7
SSR3-209ENST00000498205 GABRB1P18505 474 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 TNNI1P19237 187 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 GLRA2P23416 452 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 CALRP27797 417 aaKnown RBP4.46□□□□□ -1.7
SSR3-209ENST00000498205 GCAP28676 217 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 TIMP3P35625 211 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 KCNJ1P48048 391 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 SH3BGRP55822 239 aaPredicted RBP4.46□□□□□ -1.7
SSR3-209ENST00000498205 SNX16P57768 344 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 RPL26P61254 145 aaKnown RBP4.46□□□□□ -1.7
SSR3-209ENST00000498205 MRPS5P82675 430 aaKnown RBP4.46□□□□□ -1.7
SSR3-209ENST00000498205 SLC25A11Q02978 314 aaKnown RBP4.46□□□□□ -1.7
SSR3-209ENST00000498205 INCA1Q0VD86 236 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 TFDP2Q14188 446 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 PDK2Q15119 407 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 ZKSCAN8Q15776 578 aaPredicted RBP4.46□□□□□ -1.7
SSR3-209ENST00000498205 STXBP2Q15833 593 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 LGSNQ5TDP6 509 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 ZNF772Q68DY9 489 aaPredicted RBP4.46□□□□□ -1.7
SSR3-209ENST00000498205 CGB2Q6NT52 195 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 DNAJC24Q6P3W2 148 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 TIFABQ6ZNK6 161 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 SH2D5Q6ZV89 423 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 ZNF534Q76KX8 674 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 PLPPR4Q7Z2D5 763 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 ECHDC2Q86YB7 292 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 PSTKQ8IV42 348 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms