RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 NHLRC4P0CG21 123 aaPredicted RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 THRBP10828 461 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 GHRP10912 638 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 CHRNB1P11230 501 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 KRT13P13646 458 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 EIF2S2P20042 333 aaKnown RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 CFPP27918 469 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 CORO1AP31146 461 aaKnown RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 GABRA5P31644 462 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 CHRNA3P32297 505 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 SOX6P35712 828 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 PRPHP41219 470 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 PPP3CCP48454 512 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 MMP15P51511 669 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 CNN1P51911 297 aaKnown RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 GBX2P52951 348 aaPredicted RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 MTCP1P56278 107 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZP1P60852 638 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 ACTR1AP61163 376 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 ROR2Q01974 943 aaKnown RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 GCNT1Q02742 428 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 EEF1A2Q05639 463 aaKnown RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 DSC1Q08554 894 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 TUBA3CQ13748 450 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 PDIA5Q14554 519 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 PTPAQ15257 358 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 FAM153CQ494X1 144 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 USP39Q53GS9 565 aaKnown RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 LACTB2Q53H82 288 aaPredicted RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 LRRC73Q5JTD7 316 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 CYP4A22Q5TCH4 519 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 FHL5Q5TD97 284 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 CENPPQ6IPU0 288 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 FAM166AQ6J272 317 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 TUBA3EQ6PEY2 450 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLC36A4Q6YBV0 504 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 PAQR9Q6ZVX9 377 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 TMPRSS11FQ6ZWK6 438 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 SHFQ7M4L6 423 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZNF367Q7RTV3 350 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 PIGWQ7Z7B1 504 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 TMPRSS11BQ86T26 416 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 ADAMTSL2Q86TH1 951 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 VASH2Q86V25 355 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 ANKRD46Q86W74 232 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZC3HC1Q86WB0 502 aaKnown RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 GPSM1Q86YR5 675 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 LAX1Q8IWV1 398 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 CFAP206Q8IYR0 622 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 CPSF7Q8N684 471 aaKnown RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLC5A8Q8N695 610 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 SEMA6DQ8NFY4 1073 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 OR56B1Q8NGI3 324 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 OR5R1Q8NH85 324 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 MPLKIPQ8TAP9 179 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 OSR1Q8TAX0 266 aaPredicted RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 ELP5Q8TE02 316 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 SSMEM1Q8WWF3 244 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 FGF14Q92915 247 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 DVL3Q92997 716 aaPredicted RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 CDKN2AIPNLQ96HQ2 116 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 PIWIL1Q96J94 861 aaKnown RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 CNDP1Q96KN2 507 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 FAM20AQ96MK3 541 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 GDAP1L1Q96MZ0 367 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 SSX3Q99909 188 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 C17orf62Q9BQA9 187 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 TBCDQ9BTW9 1192 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 FTHL17Q9BXU8 183 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 RIBC2Q9H4K1 309 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 ACTL8Q9H568 366 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 COQ10BQ9H8M1 238 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 TM9SF3Q9HD45 589 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 PDGFCQ9NRA1 345 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 GSN-AS1Q9NRJ2 163 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 IL17RBQ9NRM6 502 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 PIGVQ9NUD9 493 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZNF624Q9P2J8 865 aaPredicted RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 TLK1Q9UKI8 766 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 WDR37Q9Y2I8 494 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 ASB3Q9Y575 518 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 ABCA4P78363 2273 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 SIPA1L1O43166 1804 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 KNL1Q8NG31 2342 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 PKDREJQ9NTG1 2253 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 IGHV4-28A0A0C4DH34 117 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 A0A0U1RQS6 177 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 SCO2A0A1W2PP80 73 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 LILRA5A6NI73 299 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 TMEM110-MUSTN1A8MSY1 372 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 B4DGG1 531 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 ANKRD66B4E2M5 251 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 TMEM150CB9EJG8 249 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 NPIPA3F8WFD2 350 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 TMEM189-UBE2V1I3L0A0 370 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 J3KR12 359 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 K7ENP7 123 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 UBXN8O00124 270 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLC28A1O00337 649 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 HS3ST1O14792 307 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms