RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 SUPT3HB4E1H0 165 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 CLDN4O14493 209 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 FCHO1O14526 889 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 PHGDHO43175 533 aaKnown RBP7.36□□□□□ -1.23
SRRM1-220ENST00000496882 LRRTM2O43300 516 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 ERI3O43414 337 aaKnown RBP7.36□□□□□ -1.23
SRRM1-220ENST00000496882 B3GALT2O43825 422 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 CCNT2O60583 730 aaKnown RBP7.36□□□□□ -1.23
SRRM1-220ENST00000496882 SUPT3HO75486 399 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 STK16O75716 305 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 LDLRP01130 860 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 CRABP2P29373 138 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 EEF1DP29692 281 aaKnown RBP7.36□□□□□ -1.23
SRRM1-220ENST00000496882 PHBP35232 272 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 GDF5P43026 501 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 MAGEA4P43358 317 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 SMCPP49901 116 aaPredicted RBP7.36□□□□□ -1.23
SRRM1-220ENST00000496882 SLC26A5P58743 744 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 RAB10P61026 200 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 BTN3A2P78410 334 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 PDK4Q16654 411 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 XKR6Q5GH73 641 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 FCRLBQ6BAA4 426 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 C8orf74Q6P047 294 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 CRLF3Q8IUI8 442 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.36□□□□□ -1.23
SRRM1-220ENST00000496882 KLHDC8AQ8IYD2 350 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 LGI4Q8N135 537 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 BEST3Q8N1M1 668 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 ANKRD53Q8N9V6 530 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 NR4A3Q92570 626 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 TSLPQ969D9 159 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 UBE2E3Q969T4 207 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 TMEM125Q96AQ2 219 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 PTCD3Q96EY7 689 aaKnown RBP7.36□□□□□ -1.23
SRRM1-220ENST00000496882 EAF1Q96JC9 268 aaPredicted RBP7.36□□□□□ -1.23
SRRM1-220ENST00000496882 SLX1AQ9BQ83 275 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 CCDC77Q9BR77 488 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 EFCAB11Q9BUY7 163 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 NPLQ9BXD5 320 aaPredicted RBP7.36□□□□□ -1.23
SRRM1-220ENST00000496882 UNKQ9C0B0 810 aaKnown RBP7.36□□□□□ -1.23
SRRM1-220ENST00000496882 ROGDIQ9GZN7 287 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 SPNS1Q9H2V7 528 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 CDCP1Q9H5V8 836 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 CAB39LQ9H9S4 337 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 NMRAL1Q9HBL8 299 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 LANCL2Q9NS86 450 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 SEC14L3Q9UDX4 400 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 IKZF3Q9UKT9 509 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 MMACHCQ9Y4U1 282 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 ANGPTL3Q9Y5C1 460 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.36□□□□□ -1.23
SRRM1-220ENST00000496882 SPACA6W5XKT8 324 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 SETXQ7Z333 2677 aaKnown RBP7.36□□□□□ -1.23
SRRM1-220ENST00000496882 SHANK1Q9Y566 2161 aa7.36□□□□□ -1.23
SRRM1-220ENST00000496882 TRGV8A0A0C4DH27 118 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 SAGE2PA6NJ88 616 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 GABRR3A8MPY1 467 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 SYCE1LA8MT33 242 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 A8MUA0 341 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 CXorf49A8MYA2 514 aaPredicted RBP7.35□□□□□ -1.23
SRRM1-220ENST00000496882 FAM227AF5H4B4 570 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 E2F3O00716 465 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 TP73O15350 636 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 CLEC3AO75596 197 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 PIAS1O75925 651 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 UNC5CO95185 931 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 B3GALT4O96024 378 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 CD1DP15813 335 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 SLC6A12P48065 614 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 HSPA7P48741 367 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 PLA2G16P53816 162 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 RAB38P57729 211 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 SNRPNP63162 240 aaKnown RBP7.35□□□□□ -1.23
SRRM1-220ENST00000496882 PHEXP78562 749 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 ALDH6A1Q02252 535 aaKnown RBP7.35□□□□□ -1.23
SRRM1-220ENST00000496882 IRF8Q02556 426 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 SLC13A2Q13183 592 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 TUBA3CQ13748 450 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 OR1C1Q15619 314 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 UAP1Q16222 522 aaPredicted RBP7.35□□□□□ -1.23
SRRM1-220ENST00000496882 ZXDCQ2QGD7 858 aaPredicted RBP7.35□□□□□ -1.23
SRRM1-220ENST00000496882 KBTBD12Q3ZCT8 623 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 H3F3CQ6NXT2 135 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 MTFR2Q6P444 385 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 KLC3Q6P597 504 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 TUBA3EQ6PEY2 450 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 SLCO4C1Q6ZQN7 724 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 LRRC70Q7Z2Q7 622 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 CCDC91Q7Z6B0 441 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 FJX1Q86VR8 437 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 RPS19BP1Q86WX3 136 aaKnown RBP7.35□□□□□ -1.23
SRRM1-220ENST00000496882 CA13Q8N1Q1 262 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 SPATA6LQ8N4H0 392 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 PDPRQ8NCN5 879 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 SRFBP1Q8NEF9 429 aaKnown RBP7.35□□□□□ -1.23
SRRM1-220ENST00000496882 STAG3L4Q8TBR4 150 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 FBXO25Q8TCJ0 367 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 KIAA1191Q96A73 305 aa7.35□□□□□ -1.23
SRRM1-220ENST00000496882 MAGED4Q96JG8 741 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms