RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 CYC1P08574 325 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 HIST1H1TP22492 207 aaPredicted RBP11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 CERS1P27544 350 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 SERPINB4P48594 390 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 ARFIP1P53367 373 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 TBR1Q16650 682 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 HHATQ5VTY9 493 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 FAAH2Q6GMR7 532 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 CYP20A1Q6UW02 462 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 MED25Q71SY5 747 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 PAGE2Q7Z2X7 111 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 MRGPREQ86SM8 312 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 HOMEZQ8IX15 550 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 CA13Q8N1Q1 262 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 ANKRD42Q8N9B4 389 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 ACOT4Q8N9L9 421 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 TMEM102Q8N9M5 508 aaPredicted RBP11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 ADAMTS17Q8TE56 1095 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 GATA5Q9BWX5 397 aaPredicted RBP11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 RBCK1Q9BYM8 510 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 ACBD3Q9H3P7 528 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 VIPAS39Q9H9C1 493 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 BRF2Q9HAW0 419 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 PRDM7Q9NQW5 492 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 NKIRAS1Q9NYS0 192 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 C19orf25Q9UFG5 118 aaPredicted RBP11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 ZNF225Q9UK10 706 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 G3BP2Q9UN86 482 aaKnown RBP11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 SLC12A4Q9UP95 1085 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 KMT2BQ9UMN6 2715 aaPredicted RBP11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 WDR91A4D1P6 747 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 ERVH48-1M5A8F1 160 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 AGPSO00116 658 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 RTCAO00442 366 aaKnown RBP11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 MANBAO00462 879 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 CLDN4O14493 209 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 PLPP1O14494 284 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 BIRC5O15392 142 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 PRMT3O60678 531 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 B4GALT2O60909 372 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 ALOX12BO75342 701 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 JRKO75564 520 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 SEMA3DO95025 777 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 CHEK2O96017 543 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 C8orf89P0DMQ9 161 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 UROSP10746 265 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 HSD3B1P14060 373 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 ACPPP15309 386 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 ATP5A1P25705 553 aaKnown RBP11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 HSD3B2P26439 372 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 SERPINB5P36952 375 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 ETV4P43268 484 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 LIM2P55344 173 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 ZNF33BQ06732 778 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 CSTF3Q12996 717 aaKnown RBP11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 SLAMF1Q13291 335 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 ATP1A4Q13733 1029 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 NSDHLQ15738 373 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 IMPG1Q17R60 797 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 TUBB8Q3ZCM7 444 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 AGBL2Q5U5Z8 902 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 PPP1R32Q7Z5V6 425 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 NUDT13Q86X67 352 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 GBP7Q8N8V2 638 aaPredicted RBP11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 CLEC1AQ8NC01 280 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 QRFPRQ96P65 431 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 SHCBP1LQ9BZQ2 653 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 VN1R1Q9GZP7 353 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 ING2Q9H160 280 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 LYRM4Q9HD34 91 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 FARSBQ9NSD9 589 aaKnown RBP11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 P4HTMQ9NXG6 502 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 VPS29Q9UBQ0 182 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 TIMM22Q9Y584 194 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 KCNMB2Q9Y691 235 aa11.4□□□□□ -0.58
CSNK1E-213ENST00000495232 ATMQ13315 3056 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 UQCRHLA0A096LP55 91 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 TMEM120BA0PK00 339 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 UBFD1O14562 309 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 DNAJB6O75190 326 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 ETHE1O95571 254 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 UQCRHP07919 91 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 TLX1P31314 330 aaPredicted RBP11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 RAB38P57729 211 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 GALNT1Q10472 559 aaPredicted RBP11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 SLC13A2Q13183 592 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 RUNX2Q13950 521 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 ABRAXAS2Q15018 415 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 CHI3L2Q15782 390 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 TCHHL1Q5QJ38 904 aaPredicted RBP11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 IRAK1BP1Q5VVH5 260 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 KIRREL2Q6UWL6 708 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 ZNF793Q6ZN11 406 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 ZCCHC23Q6ZST2 131 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 UBE3DQ7Z6J8 389 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 CUZD1Q86UP6 607 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 EFCAB3Q8N7B9 438 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 MGARPQ8TDB4 240 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 TLCD1Q96CP7 247 aa11.39□□□□□ -0.59
CSNK1E-213ENST00000495232 PTCHD1Q96NR3 888 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms