RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 PAGE2BQ5JRK9 111 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 CDKL4Q5MAI5 379 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 SULT1C3Q6IMI6 304 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 XKRXQ6PP77 449 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 C3orf62Q6ZUJ4 267 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 CMC1Q7Z7K0 106 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 MRGPRGQ86SM5 289 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 ZNF808Q8N4W9 903 aaPredicted RBP12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 SNX31Q8N9S9 440 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 C7orf57Q8NEG2 295 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 FBXO25Q8TCJ0 367 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 MARVELD3Q96A59 401 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 UBXN10Q96LJ8 280 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 GPR137Q96N19 417 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 QRFPRQ96P65 431 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 NT5DC2Q9H857 520 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 CHST11Q9NPF2 352 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 PRTFDC1Q9NRG1 225 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 DNAJC11Q9NVH1 559 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 CD274Q9NZQ7 290 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 ZNF490Q9ULM2 529 aaPredicted RBP12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 NPIPA1Q9UND3 350 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 UTP11Q9Y3A2 253 aaKnown RBP12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 KLF2Q9Y5W3 355 aaPredicted RBP12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 CSMD1Q96PZ7 3565 aa12.52□□□□□ -0.4
CTDSP1-212ENST00000494067 SVILO95425 2214 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 TCRBV16S1A1N1A0A5B0 115 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 ASPDHA6ND91 283 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 KLRC4-KLRK1H3BQV0 150 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 CLEC3AO75596 197 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 STK16O75716 305 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 NEURL1O76050 574 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 ABOP16442 354 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 SPRP35270 261 aaPredicted RBP12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 GGT5P36269 586 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 GP5P40197 560 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 HSPA7P48741 367 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 HSD17B7P56937 341 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 RAB38P57729 211 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 MLF1P58340 268 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 CAV1Q03135 178 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 KBTBD12Q3ZCT8 623 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 XKR6Q5GH73 641 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 SYT10Q6XYQ8 523 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 RAPH1Q70E73 1250 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 CYS1Q717R9 158 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 CTAGE3PQ8IX95 158 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 GHDCQ8N2G8 530 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 TMEM156Q8N614 296 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 POGLUT1Q8NBL1 392 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 SRFBP1Q8NEF9 429 aaKnown RBP12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 B3GNT7Q8NFL0 401 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 MS4A6EQ96DS6 147 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 PTCD3Q96EY7 689 aaKnown RBP12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 CCDC120Q96HB5 630 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 SERINC2Q96SA4 455 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 EFCAB11Q9BUY7 163 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 ROGDIQ9GZN7 287 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 REXO4Q9GZR2 422 aaKnown RBP12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 RAB17Q9H0T7 212 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 EHD1Q9H4M9 534 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 PNO1Q9NRX1 252 aaKnown RBP12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 ZNF223Q9UK11 482 aaPredicted RBP12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 FBXW2Q9UKT8 454 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 RNF112Q9ULX5 631 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 KLF13Q9Y2Y9 288 aaPredicted RBP12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 SPACA6W5XKT8 324 aa12.52□□□□□ -0.41
CTDSP1-212ENST00000494067 TRBV11-1A0A0K0K1C0 115 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 ESYT3A0FGR9 886 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 HMX2A2RU54 273 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 LRIT2A6NDA9 550 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 ASNA1O43681 348 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 NME2P1O60361 137 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 CCNT2O60583 730 aaKnown RBP12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 MYO1DO94832 1006 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 SLC35E2BP0CK96 405 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 ZNF24P17028 368 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 NME2P22392 152 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 CASQ1P31415 396 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 HLCSP50747 726 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 PLA2G16P53816 162 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 PLTPP55058 493 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 MTTPP55157 894 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 RAB10P61026 200 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 GUCY2DQ02846 1103 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 TERF2Q15554 542 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 PDK4Q16654 411 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 GRTP1Q5TC63 336 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 BNC2Q6ZN30 1099 aaPredicted RBP12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 ZNF572Q7Z3I7 529 aaPredicted RBP12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 TICAM1Q8IUC6 712 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 SPPL2CQ8IUH8 684 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 SCUBE1Q8IWY4 988 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 ZNF595Q8IYB9 648 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 PDPRQ8NCN5 879 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 OR2L5Q8NG80 312 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 STAG3L4Q8TBR4 150 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 ITLN2Q8WWU7 325 aaPredicted RBP12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 UBE2E3Q969T4 207 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms