RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 CLDN4O14493 209 aa22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 SPRP35270 261 aaPredicted RBP22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 CLCN2P51788 898 aa22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 PLA2G16P53816 162 aa22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 HSD17B7P56937 341 aa22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 ART3Q13508 389 aa22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 ADPRMQ3LIE5 342 aa22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 XKR6Q5GH73 641 aa22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 PNPLA5Q7Z6Z6 429 aaPredicted RBP22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 ZNF808Q8N4W9 903 aaPredicted RBP22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 FAM47BQ8NA70 645 aa22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 APCDD1LQ8NCL9 501 aa22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 EXT2Q93063 718 aa22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 KIAA1191Q96A73 305 aa22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 UBXN10Q96LJ8 280 aa22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 TRIM45Q9H8W5 580 aaPredicted RBP22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 PRTFDC1Q9NRG1 225 aa22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 NPIPA1Q9UND3 350 aa22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 CACNA1DQ01668 2161 aa22.13■■□□□ 1.13
RHBDD3-206ENST00000493894 ARHGAP10A1A4S6 786 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 WISP2O76076 250 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 ZNF24P17028 368 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 TRHRP34981 398 aaPredicted RBP22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 HLCSP50747 726 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 GPX6P59796 221 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 CAV1Q03135 178 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 TGM3Q08188 693 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 SLC13A2Q13183 592 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 DOC2AQ14183 400 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 SLMAPQ14BN4 828 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 PAGE2BQ5JRK9 111 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 GRTP1Q5TC63 336 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 VN1R5Q7Z5H4 357 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 MRGPRGQ86SM5 289 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 TICAM1Q8IUC6 712 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 ARMC10Q8N2F6 343 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 MARVELD3Q96A59 401 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 ESAMQ96AP7 390 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 WDR34Q96EX3 536 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 QRFPRQ96P65 431 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 SERINC2Q96SA4 455 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 RAB17Q9H0T7 212 aa22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 PNO1Q9NRX1 252 aaKnown RBP22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 KLF2Q9Y5W3 355 aaPredicted RBP22.12■■□□□ 1.13
RHBDD3-206ENST00000493894 SYNDIG1LA6NDD5 238 aa22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 CCNT2O60583 730 aaKnown RBP22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 C1QAP02745 245 aa22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 STX2P32856 288 aa22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 PLTPP55058 493 aa22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 MTTPP55157 894 aa22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 LAPTM5Q13571 262 aa22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 RCN2Q14257 317 aa22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 C3AR1Q16581 482 aa22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 KBTBD12Q3ZCT8 623 aa22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 SP5Q6BEB4 398 aaPredicted RBP22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 ADNP2Q6IQ32 1131 aa22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 LRRC70Q7Z2Q7 622 aa22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 CCDC25Q86WR0 208 aa22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 ZNF595Q8IYB9 648 aa22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 PPM1NQ8N819 430 aa22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 VMP1Q96GC9 406 aa22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 TINAGQ9UJW2 476 aa22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 PTBP2Q9UKA9 531 aaKnown RBP22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 FBXW2Q9UKT8 454 aa22.11■■□□□ 1.13
RHBDD3-206ENST00000493894 MYO7BQ6PIF6 2116 aa22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 PRAMEF4O60810 478 aa22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 TBX6O95947 436 aaPredicted RBP22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 ESRRAP11474 423 aaPredicted RBP22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 CERS1P27544 350 aa22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 CASQ1P31415 396 aa22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 HNRNPFP52597 415 aaKnown RBP22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 NAA30Q147X3 362 aaPredicted RBP22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 HIST2H2ACQ16777 129 aaPredicted RBP22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 PRAMEF9Q5VWM5 478 aa22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 HIST2H2AA3Q6FI13 130 aa22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 ABHD17CQ6PCB6 329 aa22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 BNC2Q6ZN30 1099 aaPredicted RBP22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 RAPH1Q70E73 1250 aa22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 SIAH3Q8IW03 269 aa22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 CPSF7Q8N684 471 aaKnown RBP22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 FBXO25Q8TCJ0 367 aa22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 CCDC77Q9BR77 488 aa22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 PRM3Q9NNZ6 103 aa22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 ADAP2Q9NPF8 381 aa22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 NUDT4Q9NZJ9 180 aa22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 PPIEQ9UNP9 301 aaKnown RBP22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 ZNF835Q9Y2P0 537 aa22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 KLF13Q9Y2Y9 288 aaPredicted RBP22.1■■□□□ 1.13
RHBDD3-206ENST00000493894 ASNA1O43681 348 aa22.09■■□□□ 1.13
RHBDD3-206ENST00000493894 CD22P20273 847 aa22.09■■□□□ 1.13
RHBDD3-206ENST00000493894 PPP2R1BP30154 601 aa22.09■■□□□ 1.13
RHBDD3-206ENST00000493894 LIM2P55344 173 aa22.09■■□□□ 1.13
RHBDD3-206ENST00000493894 IRF8Q02556 426 aa22.09■■□□□ 1.13
RHBDD3-206ENST00000493894 CHIT1Q13231 466 aa22.09■■□□□ 1.13
RHBDD3-206ENST00000493894 Q6ZPB1 254 aaPredicted RBP22.09■■□□□ 1.13
RHBDD3-206ENST00000493894 CLNKQ7Z7G1 428 aa22.09■■□□□ 1.13
RHBDD3-206ENST00000493894 CMC1Q7Z7K0 106 aa22.09■■□□□ 1.13
RHBDD3-206ENST00000493894 TBC1D1Q86TI0 1168 aaPredicted RBP22.09■■□□□ 1.13
RHBDD3-206ENST00000493894 ZNF227Q86WZ6 799 aa22.09■■□□□ 1.13
RHBDD3-206ENST00000493894 SPPL2CQ8IUH8 684 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms