RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 TRAV34A0A0B4J273 112 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 TRGV8A0A0C4DH27 118 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 TRBV5-4A0A0C4DH59 114 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 ZNF840PA6NDX5 716 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 KBTBD13C9JR72 458 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 PDHXO00330 501 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 ZNF749O43361 778 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 ZNF354AO60765 605 aaPredicted RBP3.29□□□□□ -1.88
ITGB1-216ENST00000493758 EEF2P13639 858 aaKnown RBP3.29□□□□□ -1.88
ITGB1-216ENST00000493758 RPL9P32969 192 aaKnown RBP3.29□□□□□ -1.88
ITGB1-216ENST00000493758 SLC1A3P43003 542 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 NPBWR1P48145 328 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 KHKP50053 298 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 ACY1Q03154 408 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 PEX6Q13608 980 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 EIPR1Q53HC9 387 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 VWA2Q5GFL6 755 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 AGAP7PQ5VUJ5 663 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 DCLRE1AQ6PJP8 1040 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 MSANTD1Q6ZTZ1 278 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 RPAINQ86UA6 219 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 NLRP14Q86W24 1093 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 ANKRD46Q86W74 232 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 HSCBQ8IWL3 235 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 RNF149Q8NC42 400 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 MR1Q95460 341 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 ALKBH3Q96Q83 286 aaPredicted RBP3.29□□□□□ -1.88
ITGB1-216ENST00000493758 RASL10BQ96S79 203 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 MINDY3Q9H8M7 445 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 C3orf14Q9HBI5 128 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 MRPL17Q9NRX2 175 aaKnown RBP3.29□□□□□ -1.88
ITGB1-216ENST00000493758 NRBP1Q9UHY1 535 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 ITGA11Q9UKX5 1188 aa3.29□□□□□ -1.88
ITGB1-216ENST00000493758 A0A087WWV3 80 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 GTPBP10A4D1E9 387 aaKnown RBP3.28□□□□□ -1.88
ITGB1-216ENST00000493758 ANKDD1BA6NHY2 528 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 ANHXE9PGG2 379 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 ACSL4O60488 711 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 FRAT2O75474 233 aaPredicted RBP3.28□□□□□ -1.88
ITGB1-216ENST00000493758 GRAP2O75791 330 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 OR6B1O95007 311 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 HCKP08631 526 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 SOAT1P35610 550 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 PRKCIP41743 596 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 BACE1P56817 501 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 BTG1P62324 171 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 RBP5P82980 135 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 FOLH1Q04609 750 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 FASTKQ14296 549 aaKnown RBP3.28□□□□□ -1.88
ITGB1-216ENST00000493758 C3AR1Q16581 482 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 CCL14Q16627 93 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 MUC21Q5SSG8 566 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 CAVIN1Q6NZI2 390 aaKnown RBP3.28□□□□□ -1.88
ITGB1-216ENST00000493758 ADCK1Q86TW2 530 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 LRRC49Q8IUZ0 686 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 CROCCP3Q8IVE0 287 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 ELMOD1Q8N336 334 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 SLC43A2Q8N370 569 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 AFAP1L1Q8TED9 768 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 SLC35C1Q96A29 364 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 SNRNP40Q96DI7 357 aaKnown RBP3.28□□□□□ -1.88
ITGB1-216ENST00000493758 SGF29Q96ES7 293 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 MARCH7Q9H992 704 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 GPR83Q9NYM4 423 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 CDH7Q9ULB5 785 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 PCDHGA1Q9Y5H4 931 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 AUP1Q9Y679 476 aa3.28□□□□□ -1.88
ITGB1-216ENST00000493758 ADAMTS9Q9P2N4 1935 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 OOEPA6NGQ2 149 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 TBCAO75347 108 aaKnown RBP3.27□□□□□ -1.89
ITGB1-216ENST00000493758 PDGFBP01127 241 aaPredicted RBP3.27□□□□□ -1.89
ITGB1-216ENST00000493758 IGKV3-15P01624 115 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 RLN1P04808 185 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 DNAH10OSP0CZ25 163 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 GP9P14770 177 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 AZU1P20160 251 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 ELK3P41970 407 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 ARHGAP1Q07960 439 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 MFGE8Q08431 387 aaPredicted RBP3.27□□□□□ -1.89
ITGB1-216ENST00000493758 CEACAM7Q14002 265 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 CASC4Q6P4E1 433 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 C17orf107Q6ZR85 190 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 MCM10Q7L590 875 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 NME8Q8N427 588 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 ATAD1Q8NBU5 361 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 CLEC1AQ8NC01 280 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 OR1B1Q8NGR6 318 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 OR13C5Q8NGS8 318 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 TYMSOSQ8TAI1 123 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 ZPLD1Q8TCW7 415 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 LIPHQ8WWY8 451 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 SMPDL3AQ92484 453 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 BPIFA2Q96DR5 249 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 LRRCC1Q9C099 1032 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 LSG1Q9H089 658 aaKnown RBP3.27□□□□□ -1.89
ITGB1-216ENST00000493758 WDR41Q9HAD4 459 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 KCNK13Q9HB14 408 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 TUFT1Q9NNX1 390 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 ZNF107Q9UII5 783 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms