RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 TMEM225Q6GV28 225 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 HMGN2P46Q86SG4 172 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 ZNF227Q86WZ6 799 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 ZSCAN4Q8NAM6 433 aaPredicted RBP13.13□□□□□ -0.31
TRIM11-204ENST00000493030 FANK1Q8TC84 345 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 WDR92Q96MX6 357 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 FCRL3Q96P31 734 aaPredicted RBP13.13□□□□□ -0.31
TRIM11-204ENST00000493030 POLDIP3Q9BY77 421 aaKnown RBP13.13□□□□□ -0.31
TRIM11-204ENST00000493030 TMEM59LQ9UK28 342 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 HCN4Q9Y3Q4 1203 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 A0A1W2PQU0 124 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 PROM1O43490 865 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 RNGTTO60942 597 aaKnown RBP13.13□□□□□ -0.31
TRIM11-204ENST00000493030 MRPL3P09001 348 aaKnown RBP13.13□□□□□ -0.31
TRIM11-204ENST00000493030 PTGR1Q14914 329 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 TRAM2Q15035 370 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 DEFB134Q4QY38 66 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 GALNT10Q86SR1 603 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 OR8K3Q8NH51 312 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 BADQ92934 168 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 XYLT2Q9H1B5 865 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 TM9SF3Q9HD45 589 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 VNN3Q9NY84 501 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 FARSAQ9Y285 508 aaKnown RBP13.13□□□□□ -0.31
TRIM11-204ENST00000493030 PCDHGB2Q9Y5G2 931 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 HEPACAM2A8MVW5 462 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 SCO2O43819 266 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 PDYNP01213 254 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 ZNF16P17020 682 aaPredicted RBP13.13□□□□□ -0.31
TRIM11-204ENST00000493030 ACRV1P26436 265 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 S100A10P60903 97 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 ERMP1Q7Z2K6 904 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 ASPGQ86U10 573 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 PLCZ1Q86YW0 608 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 KRTCAP2Q8N6L1 136 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 FAM86B1Q8N7N1 296 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 GRPEL2Q8TAA5 225 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 MRGPRX2Q96LB1 330 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 IL17FQ96PD4 163 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 ZNF717Q9BY31 904 aaPredicted RBP13.13□□□□□ -0.31
TRIM11-204ENST00000493030 NCDNQ9UBB6 729 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 SLC9A3P48764 834 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 CLRN1P58418 232 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 C6orf136Q5SQH8 315 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 SLC36A4Q6YBV0 504 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 AMIGO3Q86WK7 504 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 TRAM1L1Q8N609 369 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 IMP4Q96G21 291 aaKnown RBP13.13□□□□□ -0.31
TRIM11-204ENST00000493030 TMEM80Q96HE8 168 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 POPDC3Q9HBV1 291 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 MOV10Q9HCE1 1003 aaKnown RBP13.13□□□□□ -0.31
TRIM11-204ENST00000493030 RNF186Q9NXI6 227 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 NKX1-2Q9UD57 310 aaPredicted RBP13.13□□□□□ -0.31
TRIM11-204ENST00000493030 HCN2Q9UL51 889 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 PCDHGA2Q9Y5H1 932 aa13.13□□□□□ -0.31
TRIM11-204ENST00000493030 HTR3EA5X5Y0 456 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 GPR89AB7ZAQ6 455 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 CDC40O60508 579 aaKnown RBP eCLIP13.12□□□□□ -0.31
TRIM11-204ENST00000493030 IL3P08700 152 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 GPR89BP0CG08 455 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 PFKLP17858 780 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 UQCRC2P22695 453 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 FBXO43Q4G163 708 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 ZNF565Q8N9K5 539 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 OR6N2Q8NGY6 317 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 OSTF1Q92882 214 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 TMEM41AQ96HV5 264 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 RPF2Q9H7B2 306 aaKnown RBP13.12□□□□□ -0.31
TRIM11-204ENST00000493030 SFXN1Q9H9B4 322 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 PARPBPQ9NWS1 579 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 XPNPEP2O43895 674 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 RFPL2O75678 378 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 C1GALT1C1LP0DN25 315 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 ZBED5Q49AG3 693 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 KIAA1614Q5VZ46 1190 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 KLHDC10Q6PID8 442 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 SHKBP1Q8TBC3 707 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 ACOT12Q8WYK0 555 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 STRADBQ9C0K7 418 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 MEAF6Q9HAF1 191 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 SPATA6Q9NWH7 488 aaPredicted RBP13.12□□□□□ -0.31
TRIM11-204ENST00000493030 GPR34Q9UPC5 381 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 KANTRA0A1W2PQU2 76 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 CD9P21926 228 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 DNAJB13P59910 316 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 MVKQ03426 396 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 PMS2P3Q13401 168 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 ALG10Q5BKT4 473 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 LIPJQ5W064 366 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 FIP1L1Q6UN15 594 aaKnown RBP13.12□□□□□ -0.31
TRIM11-204ENST00000493030 ZNF783Q6ZMS7 281 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 DOK4Q8TEW6 326 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 ZNF382Q96SR6 550 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 IGLON5A6NGN9 336 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 SPARCP09486 303 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 ACADVLP49748 655 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 ANKDD1AQ495B1 522 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 OR5T2Q8NGG2 359 aa13.12□□□□□ -0.31
TRIM11-204ENST00000493030 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.12□□□□□ -0.31
TRIM11-204ENST00000493030 NSMAFQ92636 917 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms