RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ZNF24P17028 368 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 HTR1EP28566 365 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 SERPINB1P30740 379 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 SSTR1P30872 391 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 KCNC1P48547 511 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 MTTPP55157 894 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 RAB38P57729 211 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 RAB10P61026 200 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 BIKQ13323 160 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 TBCCQ15814 346 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 PDK4Q16654 411 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 XKR6Q5GH73 641 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 CCDC91Q7Z6B0 441 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.64□□□□□ -0.55
COL6A1-205ENST00000492851 KIF2BQ8N4N8 673 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 AMER2Q8N7J2 671 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 SPATA4Q8NEY3 305 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 DAZLQ92904 295 aaKnown RBP11.64□□□□□ -0.55
COL6A1-205ENST00000492851 WDR34Q96EX3 536 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 UBXN10Q96LJ8 280 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 KCNC2Q96PR1 638 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 GPR22Q99680 433 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 RBBP8Q99708 897 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 RAB17Q9H0T7 212 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 SAYSD1Q9NPB0 183 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 ADAP2Q9NPF8 381 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 TIMMDC1Q9NPL8 285 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 CD274Q9NZQ7 290 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 FBXW2Q9UKT8 454 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 RNF112Q9ULX5 631 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 YARS2Q9Y2Z4 477 aaKnown RBP11.64□□□□□ -0.55
COL6A1-205ENST00000492851 CLCA3PQ9Y6N3 262 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 NOTCH2Q04721 2471 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 CPAMD8Q8IZJ3 1885 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 CENPEQ02224 2701 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 TCRBV9S1A1TA0A576 114 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 A8MUA0 341 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 TAPBPO15533 448 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 WISP3O95389 354 aaPredicted RBP11.63□□□□□ -0.55
COL6A1-205ENST00000492851 CD1DP15813 335 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 TFEBP19484 476 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 TNFRSF8P28908 595 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 CRABP2P29373 138 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 CASP2P42575 452 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 PLA2G16P53816 162 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 IRF8Q02556 426 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 STX4Q12846 297 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 NAB1Q13506 487 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 BMPR2Q13873 1038 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 RUNX2Q13950 521 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 SERTAD2Q14140 314 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 ELAVL1Q15717 326 aaKnown RBP11.63□□□□□ -0.55
COL6A1-205ENST00000492851 C3AR1Q16581 482 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 TMEM35AQ53FP2 167 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 ABHD17CQ6PCB6 329 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 PAOXQ6QHF9 649 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 CHSY3Q70JA7 882 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 LRRC70Q7Z2Q7 622 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 SIAH3Q8IW03 269 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 SCUBE1Q8IWY4 988 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 CTAGE3PQ8IX95 158 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 SNX31Q8N9S9 440 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 APCDD1LQ8NCL9 501 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 PDPRQ8NCN5 879 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 PHF10Q8WUB8 498 aaKnown RBP11.63□□□□□ -0.55
COL6A1-205ENST00000492851 PDLIM2Q96JY6 352 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 TBCDQ9BTW9 1192 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 HES7Q9BYE0 225 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 CD244Q9BZW8 370 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 NMRAL1Q9HBL8 299 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 LYRM4Q9HD34 91 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 PNO1Q9NRX1 252 aaKnown RBP11.63□□□□□ -0.55
COL6A1-205ENST00000492851 RYDENQ9NUL5 291 aaKnown RBP11.63□□□□□ -0.55
COL6A1-205ENST00000492851 VTI1BQ9UEU0 232 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 ADGRE2Q9UHX3 823 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 SH3BGRL2Q9UJC5 107 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 PTBP2Q9UKA9 531 aaKnown RBP11.63□□□□□ -0.55
COL6A1-205ENST00000492851 DAPP1Q9UN19 280 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 MEMO1Q9Y316 297 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 CELSR2Q9HCU4 2923 aa11.63□□□□□ -0.55
COL6A1-205ENST00000492851 TRBV11-1A0A0K0K1C0 115 aa11.62□□□□□ -0.55
COL6A1-205ENST00000492851 CTAGE15A4D2H0 777 aa11.62□□□□□ -0.55
COL6A1-205ENST00000492851 FAM159BA6NKW6 160 aa11.62□□□□□ -0.55
COL6A1-205ENST00000492851 E9PLN8 166 aa11.62□□□□□ -0.55
COL6A1-205ENST00000492851 ITGA10O75578 1167 aa11.62□□□□□ -0.55
COL6A1-205ENST00000492851 IFNA16P05015 189 aa11.62□□□□□ -0.55
COL6A1-205ENST00000492851 COX6B1P14854 86 aa11.62□□□□□ -0.55
COL6A1-205ENST00000492851 HNRNPH1P31943 449 aaKnown RBP11.62□□□□□ -0.55
COL6A1-205ENST00000492851 STX2P32856 288 aa11.62□□□□□ -0.55
COL6A1-205ENST00000492851 HSPA7P48741 367 aa11.62□□□□□ -0.55
COL6A1-205ENST00000492851 SSR4P51571 173 aa11.62□□□□□ -0.55
COL6A1-205ENST00000492851 LIM2P55344 173 aa11.62□□□□□ -0.55
COL6A1-205ENST00000492851 DOC2AQ14183 400 aa11.62□□□□□ -0.55
COL6A1-205ENST00000492851 ZKSCAN8Q15776 578 aaPredicted RBP11.62□□□□□ -0.55
COL6A1-205ENST00000492851 ZNF468Q5VIY5 522 aaPredicted RBP11.62□□□□□ -0.55
COL6A1-205ENST00000492851 HSDL2Q6YN16 418 aa11.62□□□□□ -0.55
COL6A1-205ENST00000492851 RGS9BPQ6ZS82 235 aa11.62□□□□□ -0.55
COL6A1-205ENST00000492851 CAPN12Q6ZSI9 719 aa11.62□□□□□ -0.55
COL6A1-205ENST00000492851 RAPH1Q70E73 1250 aa11.62□□□□□ -0.55
COL6A1-205ENST00000492851 TBC1D1Q86TI0 1168 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms