RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 CCDC126Q96EE4 140 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 THOC3Q96J01 351 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 IMMP1LQ96LU5 166 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 AGAP4Q96P64 663 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 F2RL3Q96RI0 385 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 MESP1Q9BRJ9 268 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 ERVK-6Q9BXR3 956 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 ZBTB26Q9HCK0 441 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 DMRT3Q9NQL9 472 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 PRDM9Q9NQV7 894 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 PRDM7Q9NQW5 492 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 STK38LQ9Y2H1 464 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 RNF11Q9Y3C5 154 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 V9GYY5 206 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 A0A0G2JN53 185 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 A0A1W2PPM1 405 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 BLACEA4D250 179 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 FOXE1O00358 373 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 DLX3O60479 287 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 B4GALT2O60909 372 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 DNAJB6O75190 326 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 TGFB1P01137 390 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 PRR35P0CG20 571 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 HIST1H1TP22492 207 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 PTX3P26022 381 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 CRHR1P34998 444 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 SSR2P43308 183 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 RAP1GDS1P52306 607 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 LIM2P55344 173 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 HSD17B7P56937 341 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 CUL3Q13618 768 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 DDX39BQ13838 428 aaKnown RBP10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 RUNX2Q13950 521 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 ZRSR2Q15696 482 aaKnown RBP10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 EXT1Q16394 746 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 AP5B1Q2VPB7 878 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 SFT2D3Q587I9 215 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 CRB2Q5IJ48 1285 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 ZNF678Q5SXM1 525 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 DEPDC1Q5TB30 811 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 PLAG1Q6DJT9 500 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 IGFL2Q6UWQ7 119 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 MILR1Q7Z6M3 343 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 ZNF595Q8IYB9 648 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 SHISA5Q8N114 240 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 CYP4X1Q8N118 509 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 MYRIPQ8NFW9 859 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 RDH11Q8TC12 318 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 PPP4R1Q8TF05 950 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 TSLPQ969D9 159 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 RGMAQ96B86 450 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 L3HYPDHQ96EM0 354 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 PTCHD1Q96NR3 888 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 NSUN5Q96P11 429 aaKnown RBP10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 CDK15Q96Q40 435 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 TMEM237Q96Q45 408 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 MTERF1Q99551 399 aaKnown RBP10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 LPAR4Q99677 370 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 PARD6BQ9BYG5 372 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 ROPN1BQ9BZX4 212 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 EPS8L2Q9H6S3 715 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 ROPN1Q9HAT0 212 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 LYRM4Q9HD34 91 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 SEMA4BQ9NPR2 832 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 TRPS1Q9UHF7 1281 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 RAB21Q9UL25 225 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 GRID1Q9ULK0 1009 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 DAPP1Q9UN19 280 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 SPACA6W5XKT8 324 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 CPAMD8Q8IZJ3 1885 aa10.02□□□□□ -0.81
CDC42SE1-206ENST00000492796 HELZ2Q9BYK8 2649 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 IGKV3D-11A0A0A0MRZ8 115 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 TCRBV16S1A1N1A0A5B0 115 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 OR2W5A6NFC9 320 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 CLDN4O14493 209 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 COPEO14579 308 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 SEC24DO94855 1032 aaPredicted RBP10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 SUPT7LO94864 414 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 SEMA3DO95025 777 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 MLYCDO95822 493 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 PROCP04070 461 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 MYL2P10916 166 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 KRT4P19013 534 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 IMPDH1P20839 514 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 ATP5A1P25705 553 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 SOX11P35716 441 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 PRKAA2P54646 552 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 OR4D2P58180 307 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 RPS13P62277 151 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 CLCQ05315 142 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 SLC18A2Q05940 514 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 IFT88Q13099 833 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 MFAP5Q13361 173 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 TERF2Q15554 542 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 BTBD16Q32M84 506 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 FRG2Q64ET8 278 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 TTC19Q6DKK2 380 aaPredicted RBP10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 OR4C11Q6IEV9 310 aa10.01□□□□□ -0.81
CDC42SE1-206ENST00000492796 PAPD4Q6PIY7 484 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms