RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 GFRA3O60609 400 aa20.9■□□□□ 0.94
PSPC1-204ENST00000492741 GALR3O60755 368 aaPredicted RBP20.9■□□□□ 0.94
PSPC1-204ENST00000492741 KIAA0754O94854 1291 aa20.9■□□□□ 0.94
PSPC1-204ENST00000492741 PRDX6P30041 224 aa20.9■□□□□ 0.94
PSPC1-204ENST00000492741 CCKBRP32239 447 aa20.9■□□□□ 0.94
PSPC1-204ENST00000492741 HPCAL1P37235 193 aa20.9■□□□□ 0.94
PSPC1-204ENST00000492741 GSTM5P46439 218 aa20.9■□□□□ 0.94
PSPC1-204ENST00000492741 FAM53BQ14153 422 aa20.9■□□□□ 0.94
PSPC1-204ENST00000492741 HEPACAMQ14CZ8 416 aa20.9■□□□□ 0.94
PSPC1-204ENST00000492741 PGS1Q32NB8 556 aa20.9■□□□□ 0.94
PSPC1-204ENST00000492741 TTLL10Q6ZVT0 673 aa20.9■□□□□ 0.94
PSPC1-204ENST00000492741 EFCAB3Q8N7B9 438 aa20.9■□□□□ 0.94
PSPC1-204ENST00000492741 OR9A4Q8NGU2 314 aa20.9■□□□□ 0.94
PSPC1-204ENST00000492741 NUDT8Q8WV74 236 aa20.9■□□□□ 0.94
PSPC1-204ENST00000492741 STARD8Q92502 1023 aa20.9■□□□□ 0.94
PSPC1-204ENST00000492741 TM4SF18Q96CE8 201 aa20.9■□□□□ 0.94
PSPC1-204ENST00000492741 TMEM45AQ9NWC5 275 aa20.9■□□□□ 0.94
PSPC1-204ENST00000492741 LYARQ9NX58 379 aaKnown RBP20.9■□□□□ 0.94
PSPC1-204ENST00000492741 CLCA2Q9UQC9 943 aa20.9■□□□□ 0.94
PSPC1-204ENST00000492741 WBP11Q9Y2W2 641 aaKnown RBP20.9■□□□□ 0.94
PSPC1-204ENST00000492741 SPEGQ15772 3267 aa20.89■□□□□ 0.94
PSPC1-204ENST00000492741 CCDC154A6NI56 674 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 SGK494L7N484 410 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 PRMT3O60678 531 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 SCELO95171 688 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 COX7A2P14406 83 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 AVPR1BP47901 424 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 ALDH9A1P49189 494 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 EMP3P54852 163 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 CLDN6P56747 220 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 MC1RQ01726 317 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 MMEL1Q495T6 779 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 PRAMEF17Q5VTA0 474 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 NIPAL1Q6NVV3 410 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 BLOC1S3Q6QNY0 202 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 ZNF771Q7L3S4 317 aaPredicted RBP20.89■□□□□ 0.93
PSPC1-204ENST00000492741 SLCO6A1Q86UG4 719 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 GPR180Q86V85 440 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 ARHGEF39Q8N4T4 335 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 PRPF18Q99633 342 aaKnown RBP20.89■□□□□ 0.93
PSPC1-204ENST00000492741 SLC25A23Q9BV35 468 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 FAIM2Q9BWQ8 316 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 CLMPQ9H6B4 373 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 MIEF1Q9NQG6 463 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 SCN3AQ9NY46 2000 aa20.89■□□□□ 0.93
PSPC1-204ENST00000492741 ZFHX2Q9C0A1 2572 aaPredicted RBP20.88■□□□□ 0.93
PSPC1-204ENST00000492741 SPAARA0A1B0GVQ0 90 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 H3BMH7 237 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 ZNF749O43361 778 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 MT-CO3P00414 261 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 ATXN8OSP0DMR3 200 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 CPA2P48052 419 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 ARSFP54793 590 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 OLR1P78380 273 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 KLC1Q07866 573 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 FAM174BQ3ZCQ3 159 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 VPS26BQ4G0F5 336 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 FAM71E1Q6IPT2 247 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 IKBIPQ70UQ0 350 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 R3HCC1LQ7Z5L2 792 aaKnown RBP20.88■□□□□ 0.93
PSPC1-204ENST00000492741 PPP1R3BQ86XI6 285 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 PDSS2Q86YH6 399 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 TMEM126BQ8IUX1 230 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.88■□□□□ 0.93
PSPC1-204ENST00000492741 SPDL1Q96EA4 605 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 MMABQ96EY8 250 aaPredicted RBP20.88■□□□□ 0.93
PSPC1-204ENST00000492741 MAPKAP1Q9BPZ7 522 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 REEP4Q9H6H4 257 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 SIDT1Q9NXL6 827 aaKnown RBP20.88■□□□□ 0.93
PSPC1-204ENST00000492741 SH3BP4Q9P0V3 963 aa20.88■□□□□ 0.93
PSPC1-204ENST00000492741 SCAMP2O15127 329 aaKnown RBP20.87■□□□□ 0.93
PSPC1-204ENST00000492741 MED26O95402 600 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 CSRP1P21291 193 aaKnown RBP20.87■□□□□ 0.93
PSPC1-204ENST00000492741 CALB2P22676 271 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 RPL3P39023 403 aaKnown RBP20.87■□□□□ 0.93
PSPC1-204ENST00000492741 HNRNPH2P55795 449 aaKnown RBP20.87■□□□□ 0.93
PSPC1-204ENST00000492741 SIM1P81133 766 aaPredicted RBP20.87■□□□□ 0.93
PSPC1-204ENST00000492741 STX5Q13190 355 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 NDUFAF5Q5TEU4 345 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 MRM1Q6IN84 353 aaKnown RBP20.87■□□□□ 0.93
PSPC1-204ENST00000492741 RIMKLAQ8IXN7 391 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 DTWD1Q8N5C7 304 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 OR7A2PQ8NGA2 310 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 TESCQ96BS2 214 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 DEPDC7Q96QD5 511 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 TXLNGQ9NUQ3 528 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 TEX10Q9NXF1 929 aaPredicted RBP20.87■□□□□ 0.93
PSPC1-204ENST00000492741 DHCR7Q9UBM7 475 aaKnown RBP20.87■□□□□ 0.93
PSPC1-204ENST00000492741 PHF11Q9UIL8 331 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 ATG4BQ9Y4P1 393 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 ASB4Q9Y574 426 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 SPACA6W5XKT8 324 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 GABRR3A8MPY1 467 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 ANGPT2O15123 496 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 POLR1CO15160 346 aaPredicted RBP20.87■□□□□ 0.93
PSPC1-204ENST00000492741 FOXS1O43638 330 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 HYAL3O43820 417 aaPredicted RBP20.87■□□□□ 0.93
PSPC1-204ENST00000492741 CSO75390 466 aaKnown RBP20.87■□□□□ 0.93
PSPC1-204ENST00000492741 RDH16O75452 317 aa20.87■□□□□ 0.93
PSPC1-204ENST00000492741 NSA2O95478 260 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms