RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 ZER1Q7Z7L7 766 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 SERPINA11Q86U17 422 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 PAQR7Q86WK9 346 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 C10orf111Q8N326 155 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 DNAJC5GQ8N7S2 189 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 OR9Q1Q8NGQ5 310 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 STAG3L4Q8TBR4 150 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 SCARB1Q8WTV0 552 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 ZFPM2Q8WW38 1151 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 NTAN1Q96AB6 310 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 MRPL48Q96GC5 212 aaKnown RBP9.31□□□□□ -0.92
VPS8-225ENST00000492449 MNTQ99583 582 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 SLC38A3Q99624 504 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 NKX6-2Q9C056 277 aaPredicted RBP9.31□□□□□ -0.92
VPS8-225ENST00000492449 COA1Q9GZY4 146 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 OR51M1Q9H341 326 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 CLMPQ9H6B4 373 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 C8orf33Q9H7E9 229 aaPredicted RBP9.31□□□□□ -0.92
VPS8-225ENST00000492449 SPATA6Q9NWH7 488 aaPredicted RBP9.31□□□□□ -0.92
VPS8-225ENST00000492449 ASIC5Q9NY37 505 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 AP1M2Q9Y6Q5 423 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 COL11A1P12107 1806 aaPredicted RBP9.31□□□□□ -0.92
VPS8-225ENST00000492449 LGALS8O00214 317 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 KPNA3O00505 521 aaPredicted RBP9.31□□□□□ -0.92
VPS8-225ENST00000492449 AP2A2O94973 939 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 ZNF682O95780 498 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 S100A8P05109 93 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 HBQ1P09105 142 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 ANXA8P13928 327 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 WARSP23381 471 aaKnown RBP9.31□□□□□ -0.92
VPS8-225ENST00000492449 INPP1P49441 399 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 GDI2P50395 445 aaKnown RBP9.31□□□□□ -0.92
VPS8-225ENST00000492449 IL31Q6EBC2 164 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 FAM198BQ6UWH4 519 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 RNF165Q6ZSG1 346 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 PDZD3Q86UT5 571 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 FAM9CQ8IZT9 166 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 C7orf31Q8N865 590 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 IL17RCQ8NAC3 791 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 SH3RF2Q8TEC5 729 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 KIF12Q96FN5 646 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 SFXN2Q96NB2 322 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 KATNB1Q9BVA0 655 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 FICDQ9BVA6 458 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 CINPQ9BW66 212 aaPredicted RBP9.31□□□□□ -0.92
VPS8-225ENST00000492449 DERL2Q9GZP9 239 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 RNF32Q9H0A6 362 aa9.31□□□□□ -0.92
VPS8-225ENST00000492449 POLR3HQ9Y535 204 aaPredicted RBP9.31□□□□□ -0.92
VPS8-225ENST00000492449 MAFBQ9Y5Q3 323 aaPredicted RBP9.31□□□□□ -0.92
VPS8-225ENST00000492449 D6RAR5 112 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 HAS3O00219 553 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 GREM1O60565 184 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 DIRAS1O95057 198 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 CCNB2O95067 398 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 JCHAINP01591 159 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 NFICP08651 508 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 ACAA1P09110 424 aaPredicted RBP9.3□□□□□ -0.92
VPS8-225ENST00000492449 CPEP16870 476 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 RHCEP18577 417 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 ITGB8P26012 769 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 LCN1P31025 176 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 PSMD4P55036 377 aaKnown RBP9.3□□□□□ -0.92
VPS8-225ENST00000492449 NCF4Q15080 339 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 SUPT20HL1Q3ZLR7 823 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 ZNF648Q5T619 568 aaPredicted RBP9.3□□□□□ -0.92
VPS8-225ENST00000492449 WASH2PQ6VEQ5 465 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 KANSL1Q7Z3B3 1105 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 NAXDQ8IW45 347 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 NANOGP1Q8N7R0 232 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 IPMKQ8NFU5 416 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 OR10Q1Q8NGQ4 319 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 SFT2D1Q8WV19 159 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 TCEAL3Q969E4 200 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 PGAP3Q96FM1 320 aaPredicted RBP9.3□□□□□ -0.92
VPS8-225ENST00000492449 SCRN2Q96FV2 425 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 HPDLQ96IR7 371 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 C7orf34Q96L11 122 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 KCTD7Q96MP8 289 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 UBL7Q96S82 380 aaPredicted RBP9.3□□□□□ -0.92
VPS8-225ENST00000492449 NPY6RQ99463 290 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 PTDSS2Q9BVG9 487 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 NFKBIZQ9BYH8 718 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 FN3KQ9H479 309 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 ARNT2Q9HBZ2 717 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 ZNF275Q9NSD4 429 aaPredicted RBP9.3□□□□□ -0.92
VPS8-225ENST00000492449 RNF19AQ9NV58 838 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 DUSP12Q9UNI6 340 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 ZNF451Q9Y4E5 1061 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 STK25O00506 426 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 RAD17O75943 681 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 HTR3BO95264 441 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 RASGRP1O95267 797 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 IGHV2-70P01814 119 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 MYCLP12524 364 aaPredicted RBP9.3□□□□□ -0.92
VPS8-225ENST00000492449 UGT2B7P16662 529 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 S100PP25815 95 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 PBX3P40426 434 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 RFC3P40938 356 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 MXD1Q05195 221 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 IL18Q14116 193 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms