RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 PEX11GQ96HA9 241 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 SMIM10Q96HG1 83 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 FAM111AQ96PZ2 611 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 TAAR6Q96RI8 345 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 SLC29A3Q9BZD2 475 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 KLHL31Q9H511 634 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 EPS8L2Q9H6S3 715 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 ZFP69BQ9UJL9 534 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 ERRFI1Q9UJM3 462 aaPredicted RBP11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 PLLPQ9Y342 182 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 ANGPTL3Q9Y5C1 460 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 LRBAP50851 2863 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 ANKUB1A6NFN9 424 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 WIPF3A6NGB9 483 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 HMGB1P1B2RPK0 211 aaPredicted RBP11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 CHST10O43529 356 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 PLIN3O60664 434 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 STK16O75716 305 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 CDC123O75794 336 aaPredicted RBP11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 WDR47O94967 919 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 WDPCPO95876 746 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 TBX6O95947 436 aaPredicted RBP11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 PROCP04070 461 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 CYC1P08574 325 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 ZNF888P0CJ79 500 aaPredicted RBP11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 CREB1P16220 341 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 ALOX12P18054 663 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 AHRP35869 848 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 HSPA7P48741 367 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 ALDH18A1P54886 795 aaKnown RBP11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 CDC16Q13042 620 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 HERC3Q15034 1050 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 FBXO48Q5FWF7 155 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 ZNF324BQ6AW86 544 aaPredicted RBP11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 SLCO4C1Q6ZQN7 724 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 TMPRSS11BQ86T26 416 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 PTGR2Q8N8N7 351 aaPredicted RBP11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 ANKRD42Q8N9B4 389 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 SNX31Q8N9S9 440 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 ARMC2Q8NEN0 867 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 OR1N1Q8NGS0 311 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 RDH11Q8TC12 318 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 TCP10LQ8TDR4 215 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 SSC4DQ8WTU2 575 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 HAS2Q92819 552 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 CCDC126Q96EE4 140 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 NPAS2Q99743 824 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 TMEM79Q9BSE2 394 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 TUBB6Q9BUF5 446 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 SLC6A16Q9GZN6 736 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 C12orf65Q9H3J6 166 aaKnown RBP11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 PELI2Q9HAT8 420 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 SSU72Q9NP77 194 aaKnown RBP11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 NKIRAS1Q9NYS0 192 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 DYRK1BQ9Y463 629 aa11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 TNPO3Q9Y5L0 923 aaKnown RBP11.94□□□□□ -0.5
SEC61A1-206ENST00000491668 TM9SF1O15321 606 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 MAN1A2O60476 641 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 ZWINTO95229 277 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 SERPIND1P05546 499 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 NEFHP12036 1026 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 CPA3P15088 417 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 ATP5F1P24539 256 aaPredicted RBP11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 HPDP32754 393 aaPredicted RBP11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 ARL1P40616 181 aaPredicted RBP11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 HNF4AP41235 474 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 RAB8AP61006 207 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 SRSF11Q05519 484 aaKnown RBP11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 ASPHQ12797 758 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 ABRAXAS2Q15018 415 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 SETDB1Q15047 1291 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 TNFAIP8L3Q5GJ75 292 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 MFSD4BQ5TF39 518 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 PLAG1Q6DJT9 500 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 ADNP2Q6IQ32 1131 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 H3F3CQ6NXT2 135 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 RPUSD3Q6P087 351 aaKnown RBP11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 VN1R5Q7Z5H4 357 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 SLC22A9Q8IVM8 553 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 ST6GALNAC3Q8NDV1 305 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 PLPP5Q8NEB5 264 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 FAR1Q8WVX9 515 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 METTL21AQ8WXB1 218 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 ESAMQ96AP7 390 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 TLCD1Q96CP7 247 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 OR1F2PQ96R84 312 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 SH3GL2Q99962 352 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 PAIP2Q9BPZ3 127 aaKnown RBP11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 SLX1AQ9BQ83 275 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 CD244Q9BZW8 370 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 PRM3Q9NNZ6 103 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 SLC17A7Q9P2U7 560 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 OPTCQ9UBM4 332 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 PTBP2Q9UKA9 531 aaKnown RBP11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 EMCNQ9ULC0 261 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 ASB1Q9Y576 335 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 KCNE2Q9Y6J6 123 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 ZGRF1Q86YA3 2104 aa11.93□□□□□ -0.5
SEC61A1-206ENST00000491668 TMEM120BA0PK00 339 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 A8MT66 165 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms