RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	NEIL2	Q969S2	332 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	NEURL3	Q96EH8	262 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	OTUB1	Q96FW1	271 aa	Predicted RBP	6.07	□□□□□ -1.44
FN1-223	ENST00000490833	PDXP	Q96GD0	296 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	HSH2D	Q96JZ2	352 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	ASB16	Q96NS5	453 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	HBEGF	Q99075	208 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	DPH2	Q9BQC3	489 aa	Predicted RBP	6.07	□□□□□ -1.44
FN1-223	ENST00000490833	SLC35A5	Q9BS91	424 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	SARG	Q9BW04	601 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	BTBD2	Q9BX70	525 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	TEX101	Q9BY14	249 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	POLR2J2	Q9GZM3	115 aa	Known RBP	6.07	□□□□□ -1.44
FN1-223	ENST00000490833	POLR2J3	Q9H1A7	115 aa	Known RBP	6.07	□□□□□ -1.44
FN1-223	ENST00000490833	OR52A5	Q9H2C5	316 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	A4GALT	Q9NPC4	353 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	EXD2	Q9NVH0	621 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	IMPAD1	Q9NX62	359 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	MS4A12	Q9NXJ0	267 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	CD84	Q9UIB8	345 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	SNX7	Q9UNH6	387 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	MGAT4B	Q9UQ53	548 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	LIPT1	Q9Y234	373 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	NCKAP1	Q9Y2A7	1128 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	SLC9A8	Q9Y2E8	581 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	PCDHGB5	Q9Y5G0	923 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	PCDHGA8	Q9Y5G5	932 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	WNT6	Q9Y6F9	365 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	DENND4C	Q5VZ89	1909 aa		6.07	□□□□□ -1.44
FN1-223	ENST00000490833	MTCL1	Q9Y4B5	1905 aa	Known RBP	6.07	□□□□□ -1.44
FN1-223	ENST00000490833	TRBC2	A0A5B9	178 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ISPD	A4D126	451 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	LINC01553	A4QN01	128 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	CLDN25	C9JDP6	229 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833		H3BMQ9	156 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	CASC3	O15234	703 aa	Known RBP	6.06	□□□□□ -1.44
FN1-223	ENST00000490833	PDPK1	O15530	556 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	GPR39	O43194	453 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ASNA1	O43681	348 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	LILRB5	O75023	590 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	TNFRSF21	O75509	655 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	RFPL2	O75678	378 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	OR6B1	O95007	311 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	CCNB2	O95067	398 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	LRAT	O95237	230 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ADA	P00813	363 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	CTSL	P07711	333 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ACR	P10323	421 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ARAF	P10398	606 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	CDK4	P11802	303 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ETS2	P15036	469 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	GJA1	P17302	382 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	TACR1	P25103	407 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	HTR1B	P28222	390 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	NTS	P30990	170 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	MPI	P34949	423 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	UGT2B10	P36537	528 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	CAPZA2	P47755	286 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	RAB28	P51157	221 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	CLCNKA	P51800	687 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	CTSC	P53634	463 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	TAS2R50	P59544	299 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	DSTN	P60981	165 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ERVK-21	P61565	698 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	SKP1	P63208	163 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	PHC1	P78364	1004 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	SLC35A2	P78381	396 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	HPCA	P84074	193 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	PRR5	P85299	388 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	PRDX1	Q06830	199 aa	Known RBP	6.06	□□□□□ -1.44
FN1-223	ENST00000490833	CD47	Q08722	323 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	NFATC3	Q12968	1075 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	GPM6B	Q13491	265 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	RUNX3	Q13761	415 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ENPP2	Q13822	863 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ZNF234	Q14588	700 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	SLC9A5	Q14940	896 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	GRIN2C	Q14957	1233 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	PTPRR	Q15256	657 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	NPTX1	Q15818	432 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ZIK1	Q3SY52	487 aa	Predicted RBP	6.06	□□□□□ -1.44
FN1-223	ENST00000490833	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ATAT1	Q5SQI0	421 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	RNLS	Q5VYX0	342 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ZNF776	Q68DI1	518 aa	Predicted RBP	6.06	□□□□□ -1.44
FN1-223	ENST00000490833	KIAA1211L	Q6NV74	962 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ANGPTL8	Q6UXH0	198 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	WASH2P	Q6VEQ5	465 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	TMEM184A	Q6ZMB5	413 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	MTSS1L	Q765P7	747 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	GPR155	Q7Z3F1	870 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	P2RY8	Q86VZ1	359 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	FAM129C	Q86XR2	697 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	PTOV1	Q86YD1	416 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	VRK3	Q8IV63	474 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	6.06	□□□□□ -1.44
FN1-223	ENST00000490833	PHACTR4	Q8IZ21	702 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	OFCC1	Q8IZS5	231 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	TAGAP	Q8N103	731 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833		Q8N3U1	123 aa		6.06	□□□□□ -1.44

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