RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 CHSY3Q70JA7 882 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 UBE3DQ7Z6J8 389 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 FAM26EQ8N5C1 309 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 CLEC18CQ8NCF0 446 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 SRFBP1Q8NEF9 429 aaKnown RBP12.35□□□□□ -0.43
SHC1-211ENST00000490667 SCYL1Q96KG9 808 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 TBCDQ9BTW9 1192 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 MS4A8Q9BY19 250 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 ROGDIQ9GZN7 287 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 RNF32Q9H0A6 362 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 IPPKQ9H8X2 491 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 ACTR8Q9H981 624 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 COPS7BQ9H9Q2 264 aaPredicted RBP12.35□□□□□ -0.43
SHC1-211ENST00000490667 PRTFDC1Q9NRG1 225 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 AGPAT4Q9NRZ5 378 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 ADGRE2Q9UHX3 823 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 MMACHCQ9Y4U1 282 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 CCDC88CQ9P219 2028 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 TRAV17A0A0B4J275 112 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 TCRBV16S1A1N1A0A5B0 115 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 RIPK2O43353 540 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 SH3BGRLO75368 114 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 SIX3O95343 332 aaPredicted RBP12.34□□□□□ -0.43
SHC1-211ENST00000490667 CERS1P27544 350 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 LIM2P55344 173 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 HSD17B7P56937 341 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 MRPL49Q13405 166 aaKnown RBP12.34□□□□□ -0.43
SHC1-211ENST00000490667 GTF2H2Q13888 395 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 RCN2Q14257 317 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 NR6A1Q15406 480 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 TSNAXIP1Q2TAA8 658 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 AP5B1Q2VPB7 878 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 DEPDC1Q5TB30 811 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 FHL5Q5TD97 284 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 GTF2H2CQ6P1K8 395 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 METTL2BQ6P1Q9 378 aaKnown RBP12.34□□□□□ -0.43
SHC1-211ENST00000490667 GOLGA7Q7Z5G4 137 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 MYLK4Q86YV6 388 aaPredicted RBP12.34□□□□□ -0.43
SHC1-211ENST00000490667 ZNF595Q8IYB9 648 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 PTGR2Q8N8N7 351 aaPredicted RBP12.34□□□□□ -0.43
SHC1-211ENST00000490667 LRRN4CLQ8ND94 238 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 ELP5Q8TE02 316 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 ADAMTS18Q8TE60 1221 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 PHF21BQ96EK2 531 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 CMTM7Q96FZ5 175 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 KCNC2Q96PR1 638 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 TMCO1Q9UM00 188 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 DAPP1Q9UN19 280 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 MRPS33Q9Y291 106 aaKnown RBP12.34□□□□□ -0.43
SHC1-211ENST00000490667 PCDHGA11Q9Y5H2 935 aa12.34□□□□□ -0.43
SHC1-211ENST00000490667 ANKRD12Q6UB98 2062 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 OR5H15A6NDH6 313 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 SAP18O00422 153 aaKnown RBP12.33□□□□□ -0.44
SHC1-211ENST00000490667 RTCAO00442 366 aaKnown RBP12.33□□□□□ -0.44
SHC1-211ENST00000490667 CYR61O00622 381 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 SMIM24O75264 130 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 MYBL2P10244 700 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 ATP5A1P25705 553 aaKnown RBP12.33□□□□□ -0.44
SHC1-211ENST00000490667 GCAP28676 217 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 EEF1DP29692 281 aaKnown RBP12.33□□□□□ -0.44
SHC1-211ENST00000490667 PIK3CBP42338 1070 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 PIK3CGP48736 1102 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 HNRNPFP52597 415 aaKnown RBP12.33□□□□□ -0.44
SHC1-211ENST00000490667 TAS2R50P59544 299 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 SLC13A2Q13183 592 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 DDX39BQ13838 428 aaKnown RBP12.33□□□□□ -0.44
SHC1-211ENST00000490667 SLC29A2Q14542 456 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 MEP1AQ16819 746 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 KHDRBS2Q5VWX1 349 aaKnown RBP12.33□□□□□ -0.44
SHC1-211ENST00000490667 ADGRD1Q6QNK2 874 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 TIFABQ6ZNK6 161 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 CRLF3Q8IUI8 442 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 SCUBE1Q8IWY4 988 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 BEST3Q8N1M1 668 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 RNF175Q8N4F7 328 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 SLC5A8Q8N695 610 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 ACOT4Q8N9L9 421 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 FAM47BQ8NA70 645 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 TMEM52Q8NDY8 209 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 NFAM1Q8NET5 270 aaPredicted RBP12.33□□□□□ -0.44
SHC1-211ENST00000490667 HUS1BQ8NHY5 278 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 SUN3Q8TAQ9 357 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 PRR7Q8TB68 274 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 GRHL3Q8TE85 626 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 FAR1Q8WVX9 515 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 ATP6V1E2Q96A05 226 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 NPAS2Q99743 824 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 MRPL57Q9BQC6 102 aaKnown RBP12.33□□□□□ -0.44
SHC1-211ENST00000490667 TXLNGYQ9BZA5 131 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 OR51B5Q9H339 312 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 CDCP1Q9H5V8 836 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 PNO1Q9NRX1 252 aaKnown RBP12.33□□□□□ -0.44
SHC1-211ENST00000490667 KCMF1Q9P0J7 381 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 ABI3Q9P2A4 366 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 XPR1Q9UBH6 696 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 RNF11Q9Y3C5 154 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 TSC22D4Q9Y3Q8 395 aa12.33□□□□□ -0.44
SHC1-211ENST00000490667 MDC1Q14676 2089 aaKnown RBP12.33□□□□□ -0.44
SHC1-211ENST00000490667 ANKUB1A6NFN9 424 aa12.32□□□□□ -0.44
SHC1-211ENST00000490667 SAGE2PA6NJ88 616 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms