RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 SPACA6W5XKT8 324 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 LRRK2Q5S007 2527 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 A0A087WUV0 522 aaPredicted RBP16.36■□□□□ 0.21
SEC13-218ENST00000490283 PRAMEF4O60810 478 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 SEMA7AO75326 666 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 DDAH2O95865 285 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 CRYABP02511 175 aaKnown RBP16.36■□□□□ 0.21
SEC13-218ENST00000490283 CD22P20273 847 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 CNTFP26441 200 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 PIK3CGP48736 1102 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 ALDH18A1P54886 795 aaKnown RBP16.36■□□□□ 0.21
SEC13-218ENST00000490283 HSD17B7P56937 341 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 OC90Q02509 493 aaPredicted RBP16.36■□□□□ 0.21
SEC13-218ENST00000490283 RUNX2Q13950 521 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 SETDB1Q15047 1291 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 PFKFB4Q16877 469 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 TMEM35AQ53FP2 167 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 PRAMEF9Q5VWM5 478 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 ABHD17CQ6PCB6 329 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 VN1R5Q7Z5H4 357 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 ZNF595Q8IYB9 648 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 LGI4Q8N135 537 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 FAM47BQ8NA70 645 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 F2RL3Q96RI0 385 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 PAFAH2Q99487 392 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 ACTR8Q9H981 624 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 NECTIN3Q9NQS3 549 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 CPSF2Q9P2I0 782 aaKnown RBP16.36■□□□□ 0.21
SEC13-218ENST00000490283 SLC5A6Q9Y289 635 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 ASB1Q9Y576 335 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 HECTD1Q9ULT8 2610 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 CNTRLQ7Z7A1 2325 aa16.36■□□□□ 0.21
SEC13-218ENST00000490283 SPENQ96T58 3664 aaKnown RBP16.36■□□□□ 0.21
SEC13-218ENST00000490283 SETXQ7Z333 2677 aaKnown RBP16.36■□□□□ 0.21
SEC13-218ENST00000490283 IGKV3D-11A0A0A0MRZ8 115 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 HMX2A2RU54 273 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 A8MUA0 341 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 POC1B-GALNT4F8VUJ3 575 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 CDK2AP1O14519 115 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 ALDOAP04075 364 aaKnown RBP16.35■□□□□ 0.21
SEC13-218ENST00000490283 RBP1P09455 135 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 GP1BBP13224 206 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 EPORP19235 508 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 CERS1P27544 350 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 ESPL1Q14674 2120 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 NAA30Q147X3 362 aaPredicted RBP16.35■□□□□ 0.21
SEC13-218ENST00000490283 TERF2Q15554 542 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 TSNAXIP1Q2TAA8 658 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 AP5B1Q2VPB7 878 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 ZNF766Q5HY98 468 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 ADNP2Q6IQ32 1131 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 GRHL2Q6ISB3 625 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 RPS19BP1Q86WX3 136 aaKnown RBP16.35■□□□□ 0.21
SEC13-218ENST00000490283 IFT20Q8IY31 132 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 LAS2Q8IYD9 372 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 ELP5Q8TE02 316 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 REPS1Q96D71 796 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 CMTM7Q96FZ5 175 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 SCYL1Q96KG9 808 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 C5orf34Q96MH7 638 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 QRFPRQ96P65 431 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 TBCDQ9BTW9 1192 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 DEFB126Q9BYW3 111 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 CDCP1Q9H5V8 836 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 PNO1Q9NRX1 252 aaKnown RBP16.35■□□□□ 0.21
SEC13-218ENST00000490283 TMCO1Q9UM00 188 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 FLNCQ14315 2725 aa16.35■□□□□ 0.21
SEC13-218ENST00000490283 GABRR3A8MPY1 467 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 FCHO1O14526 889 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 MYO1DO94832 1006 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 MTHFD2P13995 350 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 CD46P15529 392 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 ARL1P40616 181 aaPredicted RBP16.34■□□□□ 0.21
SEC13-218ENST00000490283 SSR2P43308 183 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 RAP1GDS1P52306 607 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 LIM2P55344 173 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 PCDH1Q08174 1060 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 TUBA3CQ13748 450 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 DDX39BQ13838 428 aaKnown RBP16.34■□□□□ 0.21
SEC13-218ENST00000490283 E2F2Q14209 437 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 OR1C1Q15619 314 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 LGSNQ5TDP6 509 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 LIPJQ5W064 366 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 METTL2BQ6P1Q9 378 aaKnown RBP16.34■□□□□ 0.21
SEC13-218ENST00000490283 TUBA3EQ6PEY2 450 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 SCUBE1Q8IWY4 988 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 AMER2Q8N7J2 671 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 TMEM178AQ8NBL3 297 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 FAM98AQ8NCA5 519 aaKnown RBP16.34■□□□□ 0.21
SEC13-218ENST00000490283 OR7G3Q8NG95 312 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 DNAJB8Q8NHS0 232 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 ZNF473Q8WTR7 871 aaKnown RBP16.34■□□□□ 0.21
SEC13-218ENST00000490283 NR4A3Q92570 626 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 PSMG3-AS1Q96PY0 264 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 SLX1AQ9BQ83 275 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 CCDC77Q9BR77 488 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 MS4A8Q9BY19 250 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 LYRM4Q9HD34 91 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 DAPP1Q9UN19 280 aa16.34■□□□□ 0.21
SEC13-218ENST00000490283 PCDHGA11Q9Y5H2 935 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms