RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 NFKBIDQ8NI38 313 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 SCGB1C1Q8TD33 95 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 BPIFB1Q8TDL5 484 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 MROQ9BYG7 248 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 DNAJC5Q9H3Z4 198 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 PCDHB14Q9Y5E9 798 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 CCDC88CQ9P219 2028 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 TOPAZ1Q8N9V7 1692 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 POP7O75817 140 aaKnown RBP8.54□□□□□ -1.04
LSAMP-205ENST00000490035 PRLP01236 227 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 IFNA2P01563 188 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 DLDP09622 509 aaKnown RBP8.54□□□□□ -1.04
LSAMP-205ENST00000490035 GDF10P55107 478 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 ACTBP60709 375 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 ACTG1P63261 375 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 SCAPQ12770 1279 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 ZNF169Q14929 603 aaPredicted RBP8.54□□□□□ -1.04
LSAMP-205ENST00000490035 EIF2S3LQ2VIR3 472 aaKnown RBP8.54□□□□□ -1.04
LSAMP-205ENST00000490035 C22orf39Q6P5X5 142 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 CHPT1Q8WUD6 406 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 POF1BQ8WVV4 589 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 BIRC7Q96CA5 298 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 FGFBP2Q9BYJ0 223 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 CCM2LQ9NUG4 571 aaPredicted RBP8.54□□□□□ -1.04
LSAMP-205ENST00000490035 HBQ1P09105 142 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 HTR2AP28223 471 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 ADH6P28332 368 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 ST3GAL4Q11206 333 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 PARP8Q8N3A8 854 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 MS4A15Q8N5U1 240 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 SEC14L1Q92503 715 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 NDRG1Q92597 394 aaKnown RBP8.54□□□□□ -1.04
LSAMP-205ENST00000490035 C1orf226A1L170 272 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 SRCP12931 536 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 MAGEA12P43365 314 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 GPM6BQ13491 265 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 ELOCQ15369 112 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 PIGGQ5H8A4 983 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 SLC37A3Q8NCC5 494 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 HSH2DQ96JZ2 352 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 JSRP1Q96MG2 331 aaPredicted RBP8.54□□□□□ -1.04
LSAMP-205ENST00000490035 PCDHAC1Q9H158 963 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 PLCL2Q9UPR0 1127 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 AXIN1O15169 862 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 ZNF821O75541 412 aaPredicted RBP8.53□□□□□ -1.04
LSAMP-205ENST00000490035 JRKO75564 520 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 OR7A10O76100 309 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 SF3B4Q15427 424 aaKnown RBP eCLIP8.53□□□□□ -1.04
LSAMP-205ENST00000490035 HSD17B12Q53GQ0 312 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 DCAF12L1Q5VU92 463 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 LRRC66Q68CR7 880 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 ALDH16A1Q8IZ83 802 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 OR8J1Q8NGP2 316 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 ZNF431Q8TF32 576 aaPredicted RBP8.53□□□□□ -1.04
LSAMP-205ENST00000490035 KLRF1Q9NZS2 232 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 MEGF11A6BM72 1044 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 RBBP9O75884 186 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 SOD2P04179 222 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 ATF4P18848 351 aaPredicted RBP8.53□□□□□ -1.04
LSAMP-205ENST00000490035 HOXC8P31273 242 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 NUDT1P36639 197 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 POU6F2P78424 691 aaPredicted RBP8.53□□□□□ -1.04
LSAMP-205ENST00000490035 GANABQ14697 944 aaKnown RBP8.53□□□□□ -1.04
LSAMP-205ENST00000490035 ARHGAP40Q5TG30 622 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 C3orf33Q6P1S2 294 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 SPERTQ8NA61 448 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 RPLP0P6Q8NHW5 317 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 ZNF559Q9BR84 538 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 OR10A4Q9H209 315 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 C11orf49Q9H6J7 331 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 PRELID1Q9Y255 219 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 FER1L6Q2WGJ9 1857 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 LAMB1P07942 1786 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 IQCF5A8MTL0 148 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 FTCDNL1E5RQL4 147 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 H7C2Y5 167 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 RAD51DO75771 328 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 HAPLN1P10915 354 aaPredicted RBP8.53□□□□□ -1.04
LSAMP-205ENST00000490035 TDGQ13569 410 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 KIAA1161Q6NSJ0 714 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 HS3ST5Q8IZT8 346 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 JAGN1Q8N5M9 183 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 ZSCAN1Q8NBB4 408 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 ITPKCQ96DU7 683 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 TTYH2Q9BSA4 534 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 GNG8Q9UK08 70 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 CLRN1P58418 232 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 TSTQ16762 297 aaKnown RBP8.53□□□□□ -1.04
LSAMP-205ENST00000490035 TMEM156Q8N614 296 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 ZBTB8BQ8NAP8 495 aaPredicted RBP8.53□□□□□ -1.04
LSAMP-205ENST00000490035 THEM6Q8WUY1 208 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 TRIB2Q92519 343 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 BORCS8Q96FH0 119 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 LRCH3Q96II8 777 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 PIP5K1AQ99755 562 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 EBF4Q9BQW3 602 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 FUZQ9BT04 418 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 RIOK2Q9BVS4 552 aaKnown RBP8.53□□□□□ -1.04
LSAMP-205ENST00000490035 SPO11Q9Y5K1 396 aa8.53□□□□□ -1.04
LSAMP-205ENST00000490035 FAM221BA6H8Z2 402 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms