RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 LINC00303Q3SY05 128 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 MINDY4Q4G0A6 757 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 DCAF10Q5QP82 559 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 OR4C11Q6IEV9 310 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 KIRREL2Q6UWL6 708 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 RNF165Q6ZSG1 346 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 UBE3DQ7Z6J8 389 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 EXOC3L1Q86VI1 746 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 LAPTM4BQ86VI4 370 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 HPS6Q86YV9 775 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 C10orf107Q8IVU9 208 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 ZNF595Q8IYB9 648 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 CA13Q8N1Q1 262 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 CCNYL1Q8N7R7 359 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 GBP7Q8N8V2 638 aaPredicted RBP10.45□□□□□ -0.74
CPSF7-212ENST00000489728 PLPP5Q8NEB5 264 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 PEX11GQ96HA9 241 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 CNDP1Q96KN2 507 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 FAM111AQ96PZ2 611 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 MTERF1Q99551 399 aaKnown RBP10.45□□□□□ -0.74
CPSF7-212ENST00000489728 VN1R1Q9GZP7 353 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 ING2Q9H160 280 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 VIPAS39Q9H9C1 493 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 PRM3Q9NNZ6 103 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 PRDM7Q9NQW5 492 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 ACSS2Q9NR19 701 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 SLC17A7Q9P2U7 560 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 ZNF225Q9UK10 706 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 ADAM29Q9UKF5 820 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 DAPP1Q9UN19 280 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 PCDHGB7Q9Y5F8 929 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 SPACA6W5XKT8 324 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 CACNA1GO43497 2377 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 CHD6Q8TD26 2715 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 CLDN4O14493 209 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 PLPP1O14494 284 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 FFAR3O14843 346 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 BIRC5O15392 142 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 GPR42O15529 346 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 NPHS1O60500 1241 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 ALOX12BO75342 701 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 SPAG7O75391 227 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 OR4F21O95013 312 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 HMOX2P30519 316 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 ETV4P43268 484 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 SLC18A1P54219 525 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 HSD17B7P56937 341 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 RPS13P62277 151 aaKnown RBP10.44□□□□□ -0.74
CPSF7-212ENST00000489728 FAM69BQ5VUD6 431 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 SHISA6Q6ZSJ9 500 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 NDUFAF7Q7L592 441 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 PAGE2Q7Z2X7 111 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 NUDT13Q86X67 352 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 CDYL2Q8N8U2 506 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 ACOT4Q8N9L9 421 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 OR11G2Q8NGC1 345 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 OR5T3Q8NGG3 340 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 METTL6Q8TCB7 284 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 ZNF700Q9H0M5 742 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 OR51B5Q9H339 312 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 CENPHQ9H3R5 247 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 DDX31Q9H8H2 851 aaKnown RBP10.44□□□□□ -0.74
CPSF7-212ENST00000489728 EML4Q9HC35 981 aaKnown RBP10.44□□□□□ -0.74
CPSF7-212ENST00000489728 ATP13A2Q9NQ11 1180 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 PRDM9Q9NQV7 894 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 RIC8BQ9NVN3 520 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 LYARQ9NX58 379 aaKnown RBP10.44□□□□□ -0.74
CPSF7-212ENST00000489728 AHSPQ9NZD4 102 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 PHF11Q9UIL8 331 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 FBXL4Q9UKA2 621 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 IGSF10Q6WRI0 2623 aa10.44□□□□□ -0.74
CPSF7-212ENST00000489728 IGKV3D-11A0A0A0MRZ8 115 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 IGHV1-45A0A0A0MS14 117 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 A0A1B0GTL3 188 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 ARGFXA6NJG6 315 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 MANBAO00462 879 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 PPP6CO00743 305 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 PRMT3O60678 531 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 ULK1O75385 1050 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 B3GALT4O96024 378 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 BPGMP07738 259 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 COX6A1P12074 109 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 ICAM2P13598 275 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 TSPAN8P19075 237 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 CERS1P27544 350 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 PPP2R1BP30154 601 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 ALDH3A1P30838 453 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 BSGP35613 385 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 NEK2P51955 445 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 LIM2P55344 173 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 BIKQ13323 160 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 RUNX2Q13950 521 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 ABRAXAS2Q15018 415 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 TERF2Q15554 542 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 MFSD4BQ5TF39 518 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 TCTN3Q6NUS6 607 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 PCSK4Q6UW60 755 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 ZNF793Q6ZN11 406 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 RIPOR1Q6ZS17 1223 aa10.43□□□□□ -0.74
CPSF7-212ENST00000489728 RPS27LQ71UM5 84 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms