RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 AGAP11Q8TF27 550 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.77□□□□□ -0.53
COL4A5-206ENST00000489230 METTL21AQ8WXB1 218 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 TBC1D20Q96BZ9 403 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 CCT7Q99832 543 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 PAIP2Q9BPZ3 127 aaKnown RBP11.77□□□□□ -0.53
COL4A5-206ENST00000489230 SEMA4CQ9C0C4 833 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 OR51B5Q9H339 312 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 LYRM4Q9HD34 91 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 PRDM7Q9NQW5 492 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 MS4A12Q9NXJ0 267 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 POLHQ9Y253 713 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 MRPS33Q9Y291 106 aaKnown RBP11.77□□□□□ -0.53
COL4A5-206ENST00000489230 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.77□□□□□ -0.53
COL4A5-206ENST00000489230 MRPS2Q9Y399 296 aaKnown RBP11.77□□□□□ -0.53
COL4A5-206ENST00000489230 CFAP46Q8IYW2 2715 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 MDC1Q14676 2089 aaKnown RBP11.76□□□□□ -0.53
COL4A5-206ENST00000489230 TMEM114B3SHH9 223 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 PYCARD-AS1I3L0S3 204 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 FFAR3O14843 346 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 NKX2-8O15522 239 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 GPR42O15529 346 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 SLC28A2O43868 658 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 GUCY1B2O75343 617 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 RDH16O75452 317 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 TBX6O95947 436 aaPredicted RBP11.76□□□□□ -0.53
COL4A5-206ENST00000489230 PDYNP01213 254 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 ITGB2P05107 769 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 SERPINE1P05121 402 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 HIST1H1TP22492 207 aaPredicted RBP11.76□□□□□ -0.53
COL4A5-206ENST00000489230 TLX1P31314 330 aaPredicted RBP11.76□□□□□ -0.53
COL4A5-206ENST00000489230 XCR1P46094 333 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 RRADP55042 308 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 KLC1Q07866 573 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 CSTF3Q12996 717 aaKnown RBP11.76□□□□□ -0.53
COL4A5-206ENST00000489230 BIKQ13323 160 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 TUBB8Q3ZCM7 444 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 SGO1Q5FBB7 561 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 VWA2Q5GFL6 755 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 ARL13AQ5H913 290 aaPredicted RBP11.76□□□□□ -0.53
COL4A5-206ENST00000489230 COX15Q7KZN9 410 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 RAB3IL1Q8TBN0 382 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 METTL2AQ96IZ6 378 aaKnown RBP11.76□□□□□ -0.53
COL4A5-206ENST00000489230 VPS29Q9UBQ0 182 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 ZNF225Q9UK10 706 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 ADAM29Q9UKF5 820 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 MGAQ8IWI9 3026 aa11.76□□□□□ -0.53
COL4A5-206ENST00000489230 ARHGAP10A1A4S6 786 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 WDR91A4D1P6 747 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 CDC14CA4D256 554 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 UBFD1O14562 309 aaKnown RBP11.75□□□□□ -0.53
COL4A5-206ENST00000489230 AZIN1O14977 448 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 KLHL41O60662 606 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 FHP07954 510 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 ATXN8OSP0DMR3 200 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 ATP5A1P25705 553 aaKnown RBP11.75□□□□□ -0.53
COL4A5-206ENST00000489230 SSR2P43308 183 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 MAT1AQ00266 395 aaKnown RBP11.75□□□□□ -0.53
COL4A5-206ENST00000489230 CDC20Q12834 499 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 STX3Q13277 289 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 MPP2Q14168 576 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 HSP90B2PQ58FF3 399 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 ATG16L1Q676U5 607 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 CYP20A1Q6UW02 462 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 PRSS41Q7RTY9 318 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 TRIM46Q7Z4K8 759 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 UBE3DQ7Z6J8 389 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 CUZD1Q86UP6 607 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 ZCCHC7Q8N3Z6 543 aaKnown RBP11.75□□□□□ -0.53
COL4A5-206ENST00000489230 ANKRD42Q8N9B4 389 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 ACOT4Q8N9L9 421 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 TMEM102Q8N9M5 508 aaPredicted RBP11.75□□□□□ -0.53
COL4A5-206ENST00000489230 PLPP5Q8NEB5 264 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 OR6Y1Q8NGX8 325 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 TTC9Q92623 222 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 ARL8AQ96BM9 186 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 ZBTB9Q96C00 473 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 FER1L6-AS2Q96M78 137 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 SPSB2Q99619 263 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 CRB3Q9BUF7 120 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 MECRQ9BV79 373 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 ILKAPQ9H0C8 392 aaPredicted RBP11.75□□□□□ -0.53
COL4A5-206ENST00000489230 SOX17Q9H6I2 414 aaPredicted RBP11.75□□□□□ -0.53
COL4A5-206ENST00000489230 DDX31Q9H8H2 851 aaKnown RBP11.75□□□□□ -0.53
COL4A5-206ENST00000489230 ACSS2Q9NR19 701 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 HCN3Q9P1Z3 774 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 CTSFQ9UBX1 484 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 C19orf25Q9UFG5 118 aaPredicted RBP11.75□□□□□ -0.53
COL4A5-206ENST00000489230 PHF11Q9UIL8 331 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 C3orf18Q9UK00 162 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 MKL2Q9ULH7 1088 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 SLC12A4Q9UP95 1085 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 TRAF6Q9Y4K3 522 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 MRPS18BQ9Y676 258 aaKnown RBP11.75□□□□□ -0.53
COL4A5-206ENST00000489230 MAST4O15021 2626 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 TENM4Q6N022 2769 aa11.75□□□□□ -0.53
COL4A5-206ENST00000489230 ATMQ13315 3056 aa11.74□□□□□ -0.53
COL4A5-206ENST00000489230 A0A1B0GTL3 188 aa11.74□□□□□ -0.53
COL4A5-206ENST00000489230 CYSRT1A8MQ03 144 aa11.74□□□□□ -0.53
COL4A5-206ENST00000489230 IDSB3KWA1 339 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms