RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 SURF1Q15526 300 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 CDO1Q16878 200 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 PTCHD3Q3KNS1 767 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 FUT11Q495W5 492 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 C10orf62Q5T681 223 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 ARHGAP17Q68EM7 881 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 MZT2BQ6NZ67 158 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 RTL4Q6ZR62 310 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 UBE2R2Q712K3 238 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 CCDC36Q8IYA8 594 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 EIF4E3Q8N5X7 224 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 ARRDC4Q8NCT1 418 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 LPCAT1Q8NF37 534 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 OR2T12Q8NG77 320 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 ZNF431Q8TF32 576 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 SETD7Q8WTS6 366 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 ST8SIA2Q92186 375 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 SLC9A6Q92581 669 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 TSPAN17Q96FV3 270 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 ITCHQ96J02 903 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 SENP8Q96LD8 212 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 TEX37Q96LM6 180 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 KCNJ15Q99712 375 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 NPAS1Q99742 590 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 SOSTQ9BQB4 213 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 SEC22CQ9BRL7 303 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 MLPHQ9BV36 600 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 CDCA4Q9BXL8 241 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 MIXL1Q9H2W2 232 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 GHITMQ9H3K2 345 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 ZCCHC4Q9H5U6 513 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 PRDM11Q9NQV5 511 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 HEBP1Q9NRV9 189 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 SETD4Q9NVD3 440 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 TMLHEQ9NVH6 421 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 SDHAF2Q9NX18 166 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 VNN3Q9NY84 501 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 MAP3K20Q9NYL2 800 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 SLAMF8Q9P0V8 285 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 SPASTQ9UBP0 616 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 GULP1Q9UBP9 304 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 ING4Q9UNL4 249 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 ZFR2Q9UPR6 939 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 BAIAP2Q9UQB8 552 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 GINS2Q9Y248 185 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 TMEM5Q9Y2B1 443 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 SESN1Q9Y6P5 492 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 MYLKQ15746 1914 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 COL14A1Q05707 1796 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 DOCK1Q14185 1865 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 MIA3Q5JRA6 1907 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 TRBV23OR9-2A0A075B6M9 112 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 TRAV6A0A075B6T7 132 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 A0A096LPI6 279 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 UBA6A0AVT1 1052 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 OR6C65A6NJZ3 312 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 FAM220BPB1ANY3 271 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 F5H423 210 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 SMLR1H3BR10 107 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 SGK494L7N484 410 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 CXCR6O00574 342 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 GPX5O75715 221 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 MPC2O95563 127 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 F2P00734 622 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 ITGB1P05556 798 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 FGF2P09038 288 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 OR56A5P0C7T3 313 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 ODC1P11926 461 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 SYN1P17600 705 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 CTPS1P17812 591 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 LHCGRP22888 699 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 PTPN3P26045 913 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 C21orf33P30042 268 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 HSD17B2P37059 387 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 MATKP42679 507 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 SLC1A2P43004 574 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 RAB13P51153 203 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 RORCP51449 518 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 PGGT1BP53609 377 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 MTPNP58546 118 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 DCDC1P59894 354 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 ERVK-8P63133 956 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 ABATP80404 500 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 SP140Q13342 867 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 PICALMQ13492 652 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 ITPK1Q13572 414 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 BAATQ14032 418 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 CSHL1Q14406 222 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 ETFDHQ16134 617 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 SSX1Q16384 188 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 TMEM177Q53S58 311 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 PABPC1L2AQ5JQF8 200 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 MFSD14BQ5SR56 506 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 CERCAMQ5T4B2 595 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 METTL11BQ5VVY1 283 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 SCYL2Q6P3W7 929 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 METAP1DQ6UB28 335 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 LCLAT1Q6UWP7 414 aa4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 RPS27LQ71UM5 84 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-213ENST00000488131 LUZP2Q86TE4 346 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms