RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 USP43Q70EL4 1123 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 LAPTM4BQ86VI4 370 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRA2B-214ENST00000487615 HS3ST5Q8IZT8 346 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 OR5AR1Q8NGP9 310 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 FRS2Q8WU20 508 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 CRELD1Q96HD1 420 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 FAM129BQ96TA1 746 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 POLR2J2Q9GZM3 115 aaKnown RBP11.33□□□□□ -0.6
TRA2B-214ENST00000487615 DCSTAMPQ9H295 470 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 IL21Q9HBE4 155 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 CLDND1Q9NY35 253 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 ASB1Q9Y576 335 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 PEX16Q9Y5Y5 336 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 HSPE1-MOB4S4R3N1 261 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 MATN1P21941 496 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 DGKEP52429 567 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 ZNF311Q5JNZ3 666 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 ZNF57Q68EA5 555 aaPredicted RBP11.33□□□□□ -0.6
TRA2B-214ENST00000487615 IKBIPQ70UQ0 350 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 NAGSQ8N159 534 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 RNF175Q8N4F7 328 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 CAMKVQ8NCB2 501 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 RBM18Q96H35 190 aaKnown RBP11.33□□□□□ -0.6
TRA2B-214ENST00000487615 BTBD1Q9H0C5 482 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 EBF1Q9UH73 591 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 NDRG2Q9UN36 371 aaKnown RBP11.33□□□□□ -0.6
TRA2B-214ENST00000487615 GTF2A1LQ9UNN4 478 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 GPR37L1O60883 481 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 AGR2O95994 175 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 C8orf89P0DMQ9 161 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 SHMT2P34897 504 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 PMS2P3Q13401 168 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 LRRC26Q2I0M4 334 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 EIPR1Q53HC9 387 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 CAMKK1Q8N5S9 505 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 TMIEQ8NEW7 156 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 OR2M4Q96R27 311 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 PIP5K1AQ99755 562 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 ZNF385DQ9H6B1 395 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 POLMQ9NP87 494 aaPredicted RBP11.32□□□□□ -0.6
TRA2B-214ENST00000487615 IL1RAPQ9NPH3 570 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 DMRT3Q9NQL9 472 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 PHF11Q9UIL8 331 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 MAGED1Q9Y5V3 778 aaPredicted RBP11.32□□□□□ -0.6
TRA2B-214ENST00000487615 STON1Q9Y6Q2 735 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 CLDN4O14493 209 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 SLC30A4O14863 429 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 MITFO75030 526 aaPredicted RBP11.32□□□□□ -0.6
TRA2B-214ENST00000487615 GSTM3P21266 225 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 C5AR1P21730 350 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 SEPHS1P49903 392 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 PSMD7P51665 324 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 COLEC12Q5KU26 742 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 KHDRBS2Q5VWX1 349 aaKnown RBP11.32□□□□□ -0.6
TRA2B-214ENST00000487615 VRK3Q8IV63 474 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 HMGB4Q8WW32 186 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 KLHL6Q8WZ60 621 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 FEVQ99581 238 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 OR1A2Q9Y585 309 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 LOC285556D6RIA3 1793 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 FEZF1A0PJY2 475 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 J3QRK9 145 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 RNASET2O00584 256 aaKnown RBP11.32□□□□□ -0.6
TRA2B-214ENST00000487615 CASKO14936 926 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 CHST10O43529 356 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 C1orf105O95561 183 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 TSPAN12O95859 305 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 IFNGP01579 166 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 GSTM2P28161 218 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 RAB28P51157 221 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 BLKP51451 505 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 AAK1Q2M2I8 961 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 EXOC3L2Q2M3D2 409 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 KLHL22Q53GT1 634 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 Q6ZNB5 142 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 C6orf120Q7Z4R8 191 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 CACTIN-AS1Q8N1I8 211 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 GPR151Q8TDV0 419 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 CCDC115Q96NT0 180 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 CPPED1Q9BRF8 314 aaPredicted RBP11.32□□□□□ -0.6
TRA2B-214ENST00000487615 MVB12BQ9H7P6 319 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 GPR34Q9UPC5 381 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 MGAT4BQ9UQ53 548 aa11.32□□□□□ -0.6
TRA2B-214ENST00000487615 GABRR3A8MPY1 467 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 SOX14O95416 240 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 RAB30Q15771 203 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 BORAQ6PGQ7 559 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 TMPRSS11AQ6ZMR5 421 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 ABHD13Q7L211 337 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 SPRED1Q7Z699 444 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 TSPYL5Q86VY4 417 aaPredicted RBP11.31□□□□□ -0.6
TRA2B-214ENST00000487615 DCP2Q8IU60 420 aaKnown RBP11.31□□□□□ -0.6
TRA2B-214ENST00000487615 KLHDC8BQ8IXV7 354 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 ERVK-18Q9QC07 812 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 H0YIV9 168 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 RPS26P62854 115 aaKnown RBP11.31□□□□□ -0.6
TRA2B-214ENST00000487615 ABATP80404 500 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 PDZD3Q86UT5 571 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 PHOSPHO2Q8TCD6 241 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms