RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 PCDHGB7Q9Y5F8 929 aa13.82□□□□□ -0.2
LIMS3-205ENST00000487150 PCDHGA9Q9Y5G4 932 aaKnown RBP13.82□□□□□ -0.2
LIMS3-205ENST00000487150 LOC102723996A0A087X1L8 192 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 ARHGAP10A1A4S6 786 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 FOXO6A8MYZ6 492 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 FFAR3O14843 346 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 GPR42O15529 346 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 TYROBPO43914 113 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 GUCY1B2O75343 617 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 ULK1O75385 1050 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 SPAG7O75391 227 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 SNUPNO95149 360 aaKnown RBP13.81□□□□□ -0.2
LIMS3-205ENST00000487150 CHEK2O96017 543 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 PPP2R1BP30154 601 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 TLX1P31314 330 aaPredicted RBP13.81□□□□□ -0.2
LIMS3-205ENST00000487150 RPS13P62277 151 aaKnown RBP13.81□□□□□ -0.2
LIMS3-205ENST00000487150 PCLAFQ15004 111 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 ABRAXAS2Q15018 415 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 TNFAIP8L3Q5GJ75 292 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 OR4C11Q6IEV9 310 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 ADNP2Q6IQ32 1131 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 KIRREL2Q6UWL6 708 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 NDUFAF7Q7L592 441 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 C10orf107Q8IVU9 208 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 ZNF595Q8IYB9 648 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 GOLGA6L1Q8N7Z2 621 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 CDYL2Q8N8U2 506 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 ACOT4Q8N9L9 421 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 METTL6Q8TCB7 284 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 AGAP11Q8TF27 550 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 CNDP1Q96KN2 507 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 MID1IP1Q9NPA3 183 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 PRDM9Q9NQV7 894 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 ADAM29Q9UKF5 820 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 KMT2BQ9UMN6 2715 aaPredicted RBP13.81□□□□□ -0.2
LIMS3-205ENST00000487150 SPTBP11277 2137 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 SEC16AO15027 2179 aa13.81□□□□□ -0.2
LIMS3-205ENST00000487150 ANKRD12Q6UB98 2062 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 NSG1A0A0A6YYJ2 146 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 SOCS6O14544 535 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 NPHS1O60500 1241 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 PRMT3O60678 531 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 OR4F21O95013 312 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 TBX6O95947 436 aaPredicted RBP13.8□□□□□ -0.2
LIMS3-205ENST00000487150 ATP5A1P25705 553 aaKnown RBP13.8□□□□□ -0.2
LIMS3-205ENST00000487150 CERS1P27544 350 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 BUD31P41223 144 aaPredicted RBP13.8□□□□□ -0.2
LIMS3-205ENST00000487150 HSD17B7P56937 341 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 GALNT1Q10472 559 aaPredicted RBP13.8□□□□□ -0.2
LIMS3-205ENST00000487150 COL9A2Q14055 689 aaPredicted RBP13.8□□□□□ -0.2
LIMS3-205ENST00000487150 NSDHLQ15738 373 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 EXT1Q16394 746 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 FAM69BQ5VUD6 431 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 CYP20A1Q6UW02 462 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 TMEM205Q6UW68 189 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 RIPOR1Q6ZS17 1223 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 HDXQ7Z353 690 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 CA13Q8N1Q1 262 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 PLPP5Q8NEB5 264 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 OR11G2Q8NGC1 345 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 OR5T3Q8NGG3 340 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 PPP1R14CQ8TAE6 165 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 C9orf43Q8TAL5 461 aaPredicted RBP13.8□□□□□ -0.2
LIMS3-205ENST00000487150 TUBB6Q9BUF5 446 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 OR51B5Q9H339 312 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 WDR41Q9HAD4 459 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 LANCL2Q9NS86 450 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 DAPP1Q9UN19 280 aa13.8□□□□□ -0.2
LIMS3-205ENST00000487150 C4orf51C9J302 202 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 MANBAO00462 879 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 PLPP1O14494 284 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 BIRC5O15392 142 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 FAM87AP0C7U9 286 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 TSPAN8P19075 237 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 PGDP52209 483 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 LIM2P55344 173 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 SOX8P57073 446 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 OLR1P78380 273 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 RHAGQ02094 409 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 BIKQ13323 160 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 VWA5B1Q5TIE3 1220 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 TCTN3Q6NUS6 607 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 EXOC3L1Q86VI1 746 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 LAPTM4BQ86VI4 370 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 TM9SF4Q92544 642 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 LPAR4Q99677 370 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 SLC25A23Q9BV35 468 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 RBCK1Q9BYM8 510 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 AICDAQ9GZX7 198 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 ZNF700Q9H0M5 742 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 ACBD3Q9H3P7 528 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 DDX31Q9H8H2 851 aaKnown RBP13.79□□□□□ -0.2
LIMS3-205ENST00000487150 VIPAS39Q9H9C1 493 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 PFDN4Q9NQP4 134 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 PRDM7Q9NQW5 492 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 GPR83Q9NYM4 423 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 SLC17A7Q9P2U7 560 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 SLC12A4Q9UP95 1085 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 ZNF451Q9Y4E5 1061 aa13.79□□□□□ -0.2
LIMS3-205ENST00000487150 DSPP15924 2871 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms