RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 KLHDC8AQ8IYD2 350 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 SDCCAG3Q96C92 435 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 VMP1Q96GC9 406 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 QRFPRQ96P65 431 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 NPLQ9BXD5 320 aaPredicted RBP17.93■□□□□ 0.46
COL27A1-205ENST00000485397 LIN28AQ9H9Z2 209 aaKnown RBP17.93■□□□□ 0.46
COL27A1-205ENST00000485397 ITGB1BP2Q9UKP3 347 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 PPIEQ9UNP9 301 aaKnown RBP17.93■□□□□ 0.46
COL27A1-205ENST00000485397 HRH3Q9Y5N1 445 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 TP73O15350 636 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 CDC40O60508 579 aaKnown RBP eCLIP17.92■□□□□ 0.465e-6■■■■□ 21.9
COL27A1-205ENST00000485397 PIAS1O75925 651 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 SEC31AO94979 1220 aaKnown RBP17.92■□□□□ 0.46
COL27A1-205ENST00000485397 TBX6O95947 436 aaPredicted RBP17.92■□□□□ 0.46
COL27A1-205ENST00000485397 TPOP07202 933 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 TFEBP19484 476 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 NR0B1P51843 470 aaKnown RBP17.92■□□□□ 0.46
COL27A1-205ENST00000485397 PLA2G16P53816 162 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 TERF2Q15554 542 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 CMPK2Q5EBM0 449 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 FBXO48Q5FWF7 155 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 ADNP2Q6IQ32 1131 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 VN1R5Q7Z5H4 357 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 CLNKQ7Z7G1 428 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 ADAMTSL2Q86TH1 951 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 CD163Q86VB7 1156 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 SPATA6LQ8N4H0 392 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 FAM47BQ8NA70 645 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 C16orf52Q8NHV5 167 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 FAM57AQ8TBR7 257 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 SMYD2Q9NRG4 433 aa17.92■□□□□ 0.46
COL27A1-205ENST00000485397 MYOCOSA0A1B0GUC4 107 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 TAPBPO15533 448 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 B3GALT2O43825 422 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 PRAMEF4O60810 478 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 PDE9AO76083 593 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 SSTR2P30874 369 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 HSD17B7P56937 341 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 SLC13A2Q13183 592 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 PRAMEF9Q5VWM5 478 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 CREG2Q8IUH2 290 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 EID3Q8N140 333 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 KRT78Q8N1N4 520 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 ZFP62Q8NB50 900 aaPredicted RBP17.91■□□□□ 0.46
COL27A1-205ENST00000485397 TTLQ8NG68 377 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 OR52N2Q8NGI0 321 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 CA5BP1Q8WTZ4 195 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 SREK1Q8WXA9 508 aaKnown RBP17.91■□□□□ 0.46
COL27A1-205ENST00000485397 ESAMQ96AP7 390 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 VPS39Q96JC1 886 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 CSF3RQ99062 836 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 SPOCK3Q9BQ16 436 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 CCDC77Q9BR77 488 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 TMEM79Q9BSE2 394 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 MCMBPQ9BTE3 642 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 RHOJQ9H4E5 214 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 NT5DC2Q9H857 520 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 KCMF1Q9P0J7 381 aa17.91■□□□□ 0.46
COL27A1-205ENST00000485397 MTO1Q9Y2Z2 717 aaKnown RBP17.91■□□□□ 0.46
COL27A1-205ENST00000485397 OTOGQ6ZRI0 2925 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 TMEM200CA6NKL6 621 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 CLDN4O14493 209 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 CLEC3AO75596 197 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 ZFAND5O76080 213 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 WISP3O95389 354 aaPredicted RBP17.9■□□□□ 0.46
COL27A1-205ENST00000485397 CERS1P27544 350 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 SSR4P51571 173 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 TGFBIQ15582 683 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 XKR6Q5GH73 641 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 CAPN12Q6ZSI9 719 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 CEP128Q6ZU80 1094 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 MARVELD2Q8N4S9 558 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 OR2L5Q8NG80 312 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 REXO4Q9GZR2 422 aaKnown RBP17.9■□□□□ 0.46
COL27A1-205ENST00000485397 ENKD1Q9H0I2 346 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 KCNF1Q9H3M0 494 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 CAB39LQ9H9S4 337 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 ADAP2Q9NPF8 381 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 TIMMDC1Q9NPL8 285 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 DEPPQ9NTK1 212 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 COQ3Q9NZJ6 369 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 ZNF490Q9ULM2 529 aaPredicted RBP17.9■□□□□ 0.46
COL27A1-205ENST00000485397 ERVK-11Q9UQG0 969 aa17.9■□□□□ 0.46
COL27A1-205ENST00000485397 YARS2Q9Y2Z4 477 aaKnown RBP17.9■□□□□ 0.46
COL27A1-205ENST00000485397 PINLYPA6NC86 204 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 ANKDD1BA6NHY2 528 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 E7ESA3 106 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 CYR61O00622 381 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 OR2J2O76002 312 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 LIM2P55344 173 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 ADPRMQ3LIE5 342 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 ABHD17CQ6PCB6 329 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 MEX3BQ6ZN04 569 aaKnown RBP17.89■□□□□ 0.45
COL27A1-205ENST00000485397 ZNF595Q8IYB9 648 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 ACBD4Q8NC06 268 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 RUNDC3BQ96NL0 473 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 SERINC2Q96SA4 455 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 CAPS2Q9BXY5 557 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 DERL2Q9GZP9 239 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 DEFB127Q9H1M4 99 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms