RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ZNF223Q9UK11 482 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-227ENST00000485102 CLDN16Q9Y5I7 305 aa12.13□□□□□ -0.47
HDAC6-227ENST00000485102 MAD1L1Q9Y6D9 718 aa12.13□□□□□ -0.47
HDAC6-227ENST00000485102 NIPBLQ6KC79 2804 aaeCLIP12.13□□□□□ -0.47
HDAC6-227ENST00000485102 CTAGE15A4D2H0 777 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 OR14I1A6ND48 311 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 GOLGA8MH3BSY2 632 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 TTC4O95801 387 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 CTAGE8P0CG41 777 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 PGAM1P18669 254 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 TERF1P54274 439 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 CDKN2DP55273 166 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 HSD17B7P56937 341 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 DR1Q01658 176 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 KCTD19Q17RG1 926 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-227ENST00000485102 CES4AQ5XG92 561 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 CTAGE6Q86UF2 777 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 CTAGE4Q8IX94 777 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 CA13Q8N1Q1 262 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 PSD4Q8NDX1 1056 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 SPATA4Q8NEY3 305 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 OR52N2Q8NGI0 321 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 ANKRD7Q92527 254 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 SEC16BQ96JE7 1060 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 AIF1LQ9BQI0 150 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 NAT9Q9BTE0 207 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 TMUB1Q9BVT8 246 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 UCK2Q9BZX2 261 aa12.12□□□□□ -0.47
HDAC6-227ENST00000485102 CORO1CQ9ULV4 474 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-227ENST00000485102 UTP11Q9Y3A2 253 aaKnown RBP12.12□□□□□ -0.47
HDAC6-227ENST00000485102 TRBV11-1A0A0K0K1C0 115 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 PABPN1LA6NDY0 278 aaKnown RBP12.11□□□□□ -0.47
HDAC6-227ENST00000485102 TMEM200CA6NKL6 621 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 KLK8O60259 260 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 ZFAND5O76080 213 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 MYO1DO94832 1006 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 IGHG3P01860 377 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 SERPIND1P05546 499 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 DNAJA1P31689 397 aaKnown RBP12.11□□□□□ -0.47
HDAC6-227ENST00000485102 RFC3P40938 356 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 SSR4P51571 173 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 ART1P52961 327 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 RAB8AP61006 207 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 PMPCAQ10713 525 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 CRYMQ14894 314 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 GXYLT1Q4G148 440 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 RBM20Q5T481 1227 aaKnown RBP12.11□□□□□ -0.47
HDAC6-227ENST00000485102 NXPE4Q6UWF7 544 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 SBSNQ6UWP8 590 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 CLYBLQ8N0X4 340 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 NINJ1Q92982 152 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 FOXC2Q99958 501 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 ZNF559Q9BR84 538 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 AICDAQ9GZX7 198 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 KLHL31Q9H511 634 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 DEPPQ9NTK1 212 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 FBXW2Q9UKT8 454 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 VWA7Q9Y334 891 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 KCNE2Q9Y6J6 123 aa12.11□□□□□ -0.47
HDAC6-227ENST00000485102 MAP1AP78559 2803 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-227ENST00000485102 EML6Q6ZMW3 1958 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 A0A1B0GVC2 190 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 NKX2-6A6NCS4 301 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 A8MUA0 341 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 CLDN4O14493 209 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 BCKDKO14874 412 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 CDC40O60508 579 aaKnown RBP eCLIP12.1□□□□□ -0.47
HDAC6-227ENST00000485102 GLSO94925 669 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-227ENST00000485102 GSTM2P28161 218 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 NUP107P57740 925 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 GPR85P60893 370 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 STXBP1P61764 594 aaKnown RBP12.1□□□□□ -0.47
HDAC6-227ENST00000485102 CDKL1Q00532 357 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 PPP1R3AQ16821 1122 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 HYAL4Q2M3T9 481 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 SPANXN3Q5MJ09 141 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 NDUFAF5Q5TEU4 345 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 THOC6Q86W42 341 aaKnown RBP12.1□□□□□ -0.47
HDAC6-227ENST00000485102 PPIL6Q8IXY8 311 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 ZNF595Q8IYB9 648 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 RPRMLQ8N4K4 120 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 MYRIPQ8NFW9 859 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 TTLQ8NG68 377 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 OR2M7Q8NG81 312 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 GAL3ST3Q96A11 431 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 CCDC77Q9BR77 488 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 PITHD1Q9GZP4 211 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-227ENST00000485102 TSPYL1Q9H0U9 437 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 ADAP2Q9NPF8 381 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 MYOTQ9UBF9 498 aa12.1□□□□□ -0.47
HDAC6-227ENST00000485102 MPDZO75970 2070 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 FAM90A27PA6NNH2 459 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 A8MVJ9 347 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 C4orf51C9J302 202 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 ACOT7O00154 380 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 ACVR2AP27037 513 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 HNF4AP41235 474 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 HNMTP50135 292 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 PPIAP62937 165 aaKnown RBP12.09□□□□□ -0.47
HDAC6-227ENST00000485102 CAV1Q03135 178 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms