RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 SOX6P35712 828 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 SLC1A3P43003 542 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 PDLIM4P50479 330 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 GEMP55040 296 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 OR1D5P58170 312 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 OVGP1Q12889 678 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 SRSF9Q13242 221 aaKnown RBP eCLIP4.04□□□□□ -1.76
VPS13A-211ENST00000484581 CEACAM7Q14002 265 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 GRB14Q14449 540 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 SQLEQ14534 574 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 SLC25A53Q5H9E4 307 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 LCN1P1Q5VSP4 162 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 IL23RQ5VWK5 629 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 OR4C11Q6IEV9 310 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 CEACAM20Q6UY09 585 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 TMEM26Q6ZUK4 368 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.04□□□□□ -1.76
VPS13A-211ENST00000484581 ZC3H3Q8IXZ2 948 aaKnown RBP4.04□□□□□ -1.76
VPS13A-211ENST00000484581 GPC2Q8N158 579 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 CERS5Q8N5B7 392 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 FAM89BQ8N5H3 189 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 METTL27Q8N6F8 245 aaPredicted RBP4.04□□□□□ -1.76
VPS13A-211ENST00000484581 BCORP1Q8N888 145 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 ZNF383Q8NA42 475 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 SLC37A3Q8NCC5 494 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 OR6M1Q8NGM8 313 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 SORCS1Q8WY21 1168 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 RAB39BQ96DA2 213 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 IL17FQ96PD4 163 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 IWS1Q96ST2 819 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 GPA33Q99795 319 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 CCM2Q9BSQ5 444 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 TPPP3Q9BW30 176 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 CARD6Q9BX69 1037 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 UPF2Q9HAU5 1272 aaKnown RBP4.04□□□□□ -1.76
VPS13A-211ENST00000484581 VAT1LQ9HCJ6 419 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 DDX28Q9NUL7 540 aaKnown RBP4.04□□□□□ -1.76
VPS13A-211ENST00000484581 PRDM4Q9UKN5 801 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 ELF5Q9UKW6 265 aaPredicted RBP4.04□□□□□ -1.76
VPS13A-211ENST00000484581 SATB2Q9UPW6 733 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 MGAT4BQ9UQ53 548 aa4.04□□□□□ -1.76
VPS13A-211ENST00000484581 A8MVM7 634 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 H0YCG3 227 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 SMAD6O43541 496 aaKnown RBP4.03□□□□□ -1.76
VPS13A-211ENST00000484581 LANCL1O43813 399 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 ZBTB11O95625 1053 aaPredicted RBP4.03□□□□□ -1.76
VPS13A-211ENST00000484581 MT-ND2P03891 347 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 APRTP07741 180 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 PRG2P13727 222 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 RPS2P15880 293 aaKnown RBP4.03□□□□□ -1.76
VPS13A-211ENST00000484581 HLA-FP30511 346 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 ALDH3B1P43353 468 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 CCR4P51679 360 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 DVL1P1P54792 670 aaPredicted RBP4.03□□□□□ -1.76
VPS13A-211ENST00000484581 MYBPC1Q00872 1141 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 HSF2Q03933 536 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 LTBQ06643 244 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 HSPA14Q0VDF9 509 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 MEF2DQ14814 521 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 HEPACAMQ14CZ8 416 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 EXT1Q16394 746 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 FGD3Q5JSP0 725 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 LDLRAP1Q5SW96 308 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 SNRNP48Q6IEG0 339 aaKnown RBP4.03□□□□□ -1.76
VPS13A-211ENST00000484581 CAPRIN2Q6IMN6 1127 aaKnown RBP4.03□□□□□ -1.76
VPS13A-211ENST00000484581 TCEAL6Q6IPX3 200 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 C17orf107Q6ZR85 190 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 RGS9BPQ6ZS82 235 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 ARMCX2Q7L311 632 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 C5orf24Q7Z6I8 188 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 MISPQ8IVT2 679 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 SLC43A2Q8N370 569 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 LRRC17Q8N6Y2 441 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 COLGALT1Q8NBJ5 622 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 SLC5A11Q8WWX8 675 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 FCGR1BQ92637 280 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 BPIFA2Q96DR5 249 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 ST6GAL2Q96JF0 529 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 RPGRIP1Q96KN7 1286 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 LMLNQ96KR4 655 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 PSD2Q9BQI7 771 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 FICDQ9BVA6 458 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 ZNF416Q9BWM5 594 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 FAM49AQ9H0Q0 323 aaPredicted RBP4.03□□□□□ -1.76
VPS13A-211ENST00000484581 THAP2Q9H0W7 228 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 MTIF3Q9H2K0 278 aaKnown RBP4.03□□□□□ -1.76
VPS13A-211ENST00000484581 EGLN3Q9H6Z9 239 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 ACTR8Q9H981 624 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 EPHA6Q9UF33 1036 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 LAMP5Q9UJQ1 280 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 PROCRQ9UNN8 238 aa4.03□□□□□ -1.76
VPS13A-211ENST00000484581 RRP15Q9Y3B9 282 aaKnown RBP4.03□□□□□ -1.76
VPS13A-211ENST00000484581 NPC1L1Q9UHC9 1359 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 GREB1LQ9C091 1923 aaPredicted RBP4.02□□□□□ -1.77
VPS13A-211ENST00000484581 IGHV4-61A0A0C4DH41 118 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 FAM230AA0A1W2PPH8 454 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 DENND3A2RUS2 1198 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 GPR89AB7ZAQ6 455 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 ARPC1BO15143 372 aaKnown RBP4.02□□□□□ -1.77
VPS13A-211ENST00000484581 EPHB6O15197 1021 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms