RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 PRDM7Q9NQW5 492 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 GRID1Q9ULK0 1009 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 TSC22D4Q9Y3Q8 395 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 NBASA2RRP1 2371 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 IGHV3-20A0A0C4DH32 117 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 SAP18O00422 153 aaKnown RBP17.3■□□□□ 0.36
SMIM4-204ENST00000482728 CLDN4O14493 209 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 COPEO14579 308 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 DLX3O60479 287 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 SEC24DO94855 1032 aaPredicted RBP17.3■□□□□ 0.36
SMIM4-204ENST00000482728 SUPT7LO94864 414 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 OTCP00480 354 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 SERPINA7P05543 415 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 UQCRHP07919 91 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 RPS17P08708 135 aaKnown RBP17.3■□□□□ 0.36
SMIM4-204ENST00000482728 CERS1P27544 350 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 CRHR1P34998 444 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 EFNA3P52797 238 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 CDH13P55290 713 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 OR4D2P58180 307 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 Q0VFX4 171 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 PCOLCEQ15113 449 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 RIBC1Q8N443 379 aaPredicted RBP17.3■□□□□ 0.36
SMIM4-204ENST00000482728 ADAMTS18Q8TE60 1221 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 ZNF483Q8TF39 744 aaPredicted RBP17.3■□□□□ 0.36
SMIM4-204ENST00000482728 MTFMTQ96DP5 389 aaKnown RBP17.3■□□□□ 0.36
SMIM4-204ENST00000482728 MAGEB10Q96LZ2 347 aaPredicted RBP17.3■□□□□ 0.36
SMIM4-204ENST00000482728 C1QTNF3Q9BXJ4 246 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 ROPN1BQ9BZX4 212 aaPredicted RBP17.3■□□□□ 0.36
SMIM4-204ENST00000482728 ROPN1Q9HAT0 212 aaPredicted RBP17.3■□□□□ 0.36
SMIM4-204ENST00000482728 ZBTB26Q9HCK0 441 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 DMRT3Q9NQL9 472 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 PRDM9Q9NQV7 894 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 MRPS33Q9Y291 106 aaKnown RBP17.3■□□□□ 0.36
SMIM4-204ENST00000482728 NUP210LQ5VU65 1888 aa17.3■□□□□ 0.36
SMIM4-204ENST00000482728 PRR35P0CG20 571 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 KRT4P19013 534 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 IMPDH1P20839 514 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 ATP5A1P25705 553 aaKnown RBP17.29■□□□□ 0.36
SMIM4-204ENST00000482728 CASRP41180 1078 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 SSR2P43308 183 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 NEK2P51955 445 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 PRKAA2P54646 552 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 RAB38P57729 211 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 RPS13P62277 151 aaKnown RBP17.29■□□□□ 0.36
SMIM4-204ENST00000482728 BTG2P78543 158 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 IFT88Q13099 833 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 SFT2D3Q587I9 215 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 OR4C11Q6IEV9 310 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 QSOX2Q6ZRP7 698 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 RIPOR1Q6ZS17 1223 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 SH2D5Q6ZV89 423 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 UBE3DQ7Z6J8 389 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 RNF175Q8N4F7 328 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 ZADH2Q8N4Q0 377 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 ACOT4Q8N9L9 421 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 TRPC4APQ8TEL6 797 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 TSLPQ969D9 159 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 CCDC126Q96EE4 140 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 IMMP1LQ96LU5 166 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 LPAR4Q99677 370 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 MFRPQ9BY79 579 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 SPACA6W5XKT8 324 aa17.29■□□□□ 0.36
SMIM4-204ENST00000482728 FOXE1O00358 373 aaPredicted RBP17.28■□□□□ 0.36
SMIM4-204ENST00000482728 RTCAO00442 366 aaKnown RBP17.28■□□□□ 0.36
SMIM4-204ENST00000482728 MYL2P10916 166 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 TSPAN8P19075 237 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 MAOAP21397 527 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 HIST1H1TP22492 207 aaPredicted RBP17.28■□□□□ 0.36
SMIM4-204ENST00000482728 LIM2P55344 173 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 CLCQ05315 142 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 TRAF3Q13114 568 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 SLC13A2Q13183 592 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 BTBD16Q32M84 506 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 CCDC153Q494R4 210 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 UNC50Q53HI1 259 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 SGO1Q5FBB7 561 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 COLEC12Q5KU26 742 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 C10orf62Q5T681 223 aaPredicted RBP17.28■□□□□ 0.36
SMIM4-204ENST00000482728 FRG2Q64ET8 278 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 JMJD6Q6NYC1 403 aaPredicted RBP17.28■□□□□ 0.36
SMIM4-204ENST00000482728 IGFL3Q6UXB1 125 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 ISLR2Q6UXK2 745 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 RPS27LQ71UM5 84 aaKnown RBP17.28■□□□□ 0.36
SMIM4-204ENST00000482728 CCDC63Q8NA47 563 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 OR4F6Q8NGB9 312 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 FRG2BQ96QU4 278 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 ELOVL6Q9H5J4 265 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 LYRM4Q9HD34 91 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 PRTFDC1Q9NRG1 225 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 PSD3Q9NYI0 1048 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 DAPP1Q9UN19 280 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 MMACHCQ9Y4U1 282 aa17.28■□□□□ 0.36
SMIM4-204ENST00000482728 HELZ2Q9BYK8 2649 aaKnown RBP17.27■□□□□ 0.36
SMIM4-204ENST00000482728 PLA2G2AP14555 144 aa17.27■□□□□ 0.36
SMIM4-204ENST00000482728 DEKP35659 375 aaKnown RBP17.27■□□□□ 0.36
SMIM4-204ENST00000482728 HSD17B7P56937 341 aa17.27■□□□□ 0.36
SMIM4-204ENST00000482728 CUL3Q13618 768 aa17.27■□□□□ 0.36
SMIM4-204ENST00000482728 EXT1Q16394 746 aa17.27■□□□□ 0.36
SMIM4-204ENST00000482728 NADK2Q4G0N4 442 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms