RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 RBCK1Q9BYM8 510 aa19.72■□□□□ 0.75
SEC13-217ENST00000482647 PPT2Q9UMR5 302 aa19.72■□□□□ 0.75
SEC13-217ENST00000482647 G3BP2Q9UN86 482 aaKnown RBP19.72■□□□□ 0.75
SEC13-217ENST00000482647 BOD1L1Q8NFC6 3051 aa19.72■□□□□ 0.75
SEC13-217ENST00000482647 EIF4E1BA6NMX2 242 aaKnown RBP19.71■□□□□ 0.75
SEC13-217ENST00000482647 B4GALT2O60909 372 aa19.71■□□□□ 0.75
SEC13-217ENST00000482647 HIST1H1TP22492 207 aaPredicted RBP19.71■□□□□ 0.75
SEC13-217ENST00000482647 ATP5A1P25705 553 aaKnown RBP19.71■□□□□ 0.75
SEC13-217ENST00000482647 CERS1P27544 350 aa19.71■□□□□ 0.75
SEC13-217ENST00000482647 TSFMP43897 325 aaKnown RBP19.71■□□□□ 0.75
SEC13-217ENST00000482647 ASPHQ12797 758 aa19.71■□□□□ 0.75
SEC13-217ENST00000482647 RCN2Q14257 317 aa19.71■□□□□ 0.75
SEC13-217ENST00000482647 SGO1Q5FBB7 561 aa19.71■□□□□ 0.75
SEC13-217ENST00000482647 LIPMQ5VYY2 423 aa19.71■□□□□ 0.75
SEC13-217ENST00000482647 OR4C11Q6IEV9 310 aa19.71■□□□□ 0.75
SEC13-217ENST00000482647 NDUFAF7Q7L592 441 aa19.71■□□□□ 0.75
SEC13-217ENST00000482647 C10orf107Q8IVU9 208 aa19.71■□□□□ 0.75
SEC13-217ENST00000482647 PLPP5Q8NEB5 264 aa19.71■□□□□ 0.75
SEC13-217ENST00000482647 ADAMTS18Q8TE60 1221 aa19.71■□□□□ 0.75
SEC13-217ENST00000482647 PGM2Q96G03 612 aa19.71■□□□□ 0.75
SEC13-217ENST00000482647 ABHD17AQ96GS6 310 aa19.71■□□□□ 0.75
SEC13-217ENST00000482647 SERPINI1Q99574 410 aa19.71■□□□□ 0.75
SEC13-217ENST00000482647 GSTO2Q9H4Y5 243 aa19.71■□□□□ 0.75
SEC13-217ENST00000482647 C19orf25Q9UFG5 118 aaPredicted RBP19.71■□□□□ 0.75
SEC13-217ENST00000482647 LOC102723996A0A087X1L8 192 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 OR2W5A6NFC9 320 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 CTIFO43310 598 aaKnown RBP19.7■□□□□ 0.74
SEC13-217ENST00000482647 OR4F21O95013 312 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 ESRRBO95718 433 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 HPP00738 406 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 ENO1P06733 434 aaKnown RBP19.7■□□□□ 0.74
SEC13-217ENST00000482647 MYZAPP0CAP1 466 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 CREB1P16220 341 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 SSR2P43308 183 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 LIM2P55344 173 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 RHAGQ02094 409 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 AIMP2Q13155 320 aaKnown RBP19.7■□□□□ 0.74
SEC13-217ENST00000482647 NSDHLQ15738 373 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 CDYL2Q8N8U2 506 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 ACOT4Q8N9L9 421 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 C9orf43Q8TAL5 461 aaPredicted RBP19.7■□□□□ 0.74
SEC13-217ENST00000482647 METTL6Q8TCB7 284 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 MESP1Q9BRJ9 268 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 SLC29A3Q9BZD2 475 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 STMN4Q9H169 189 aaPredicted RBP19.7■□□□□ 0.74
SEC13-217ENST00000482647 LYRM4Q9HD34 91 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 SLC17A7Q9P2U7 560 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 ZNF225Q9UK10 706 aa19.7■□□□□ 0.74
SEC13-217ENST00000482647 NSG1A0A0A6YYJ2 146 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 A0A1W2PQ72 361 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 A6NL46 340 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 FAM227AF5H4B4 570 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 H3BQF6 201 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 RTCAO00442 366 aaKnown RBP19.69■□□□□ 0.74
SEC13-217ENST00000482647 TYROBPO43914 113 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 PRMT3O60678 531 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 TRIM13O60858 407 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 CEACAM4O75871 244 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 SCELO95171 688 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 KRT6AP02538 564 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 KRT6BP04259 564 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 KRT6CP48668 564 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 EFNA3P52797 238 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 RAB38P57729 211 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 PCLAFQ15004 111 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 ABRAXAS2Q15018 415 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 ZNF793Q6ZN11 406 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 FRMD7Q6ZUT3 714 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 CPEB2Q7Z5Q1 589 aaKnown RBP19.69■□□□□ 0.74
SEC13-217ENST00000482647 EXOC3L1Q86VI1 746 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 GALNT16Q8N428 558 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 SELENOMQ8WWX9 145 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 SLC25A23Q9BV35 468 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 ZNF700Q9H0M5 742 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 SLC25A18Q9H1K4 315 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 ZNF160Q9HCG1 818 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 SSU72Q9NP77 194 aaKnown RBP19.69■□□□□ 0.74
SEC13-217ENST00000482647 AHSPQ9NZD4 102 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 DAPP1Q9UN19 280 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 MRPS33Q9Y291 106 aaKnown RBP19.69■□□□□ 0.74
SEC13-217ENST00000482647 SPACA6W5XKT8 324 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 SCN3AQ9NY46 2000 aa19.69■□□□□ 0.74
SEC13-217ENST00000482647 CCDC88CQ9P219 2028 aa19.68■□□□□ 0.74
SEC13-217ENST00000482647 SMG1Q96Q15 3661 aaKnown RBP19.68■□□□□ 0.74
SEC13-217ENST00000482647 IGHV1-45A0A0A0MS14 117 aa19.68■□□□□ 0.74
SEC13-217ENST00000482647 MANBAO00462 879 aa19.68■□□□□ 0.74
SEC13-217ENST00000482647 CLDN4O14493 209 aa19.68■□□□□ 0.74
SEC13-217ENST00000482647 PLPP1O14494 284 aa19.68■□□□□ 0.74
SEC13-217ENST00000482647 KLHL41O60662 606 aa19.68■□□□□ 0.74
SEC13-217ENST00000482647 ULK1O75385 1050 aa19.68■□□□□ 0.74
SEC13-217ENST00000482647 SEMA3DO95025 777 aa19.68■□□□□ 0.74
SEC13-217ENST00000482647 ETHE1O95571 254 aa19.68■□□□□ 0.74
SEC13-217ENST00000482647 PDYNP01213 254 aa19.68■□□□□ 0.74
SEC13-217ENST00000482647 COX6A1P12074 109 aa19.68■□□□□ 0.74
SEC13-217ENST00000482647 SOX8P57073 446 aa19.68■□□□□ 0.74
SEC13-217ENST00000482647 EEF1A2Q05639 463 aaKnown RBP19.68■□□□□ 0.74
SEC13-217ENST00000482647 SLAMF1Q13291 335 aa19.68■□□□□ 0.74
SEC13-217ENST00000482647 TNFAIP8L3Q5GJ75 292 aa19.68■□□□□ 0.74
SEC13-217ENST00000482647 QSOX2Q6ZRP7 698 aa19.68■□□□□ 0.74
SEC13-217ENST00000482647 ANKRD37Q7Z713 158 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms