RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 FAM53BQ14153 422 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 ERV3-1Q14264 604 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 C10orf62Q5T681 223 aaPredicted RBP12.52□□□□□ -0.41
HDAC1-208ENST00000482310 ACSM2BQ68CK6 577 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 NXNQ6DKJ4 435 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 FAM198BQ6UWH4 519 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 NUDT13Q86X67 352 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 GBP7Q8N8V2 638 aaPredicted RBP12.52□□□□□ -0.41
HDAC1-208ENST00000482310 ACOT4Q8N9L9 421 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 SRFBP1Q8NEF9 429 aaKnown RBP12.52□□□□□ -0.41
HDAC1-208ENST00000482310 OR51Q1Q8NH59 317 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 PIWIL2Q8TC59 973 aaKnown RBP12.52□□□□□ -0.41
HDAC1-208ENST00000482310 TUBGCP3Q96CW5 907 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 SMIM10Q96HG1 83 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 C7orf26Q96N11 449 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 QRFPRQ96P65 431 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 SERINC2Q96SA4 455 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 MAPKAP1Q9BPZ7 522 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 TBCDQ9BTW9 1192 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 C1orf50Q9BV19 199 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 ZNF717Q9BY31 904 aaPredicted RBP12.52□□□□□ -0.41
HDAC1-208ENST00000482310 RABEP2Q9H5N1 569 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 SOX17Q9H6I2 414 aaPredicted RBP12.52□□□□□ -0.41
HDAC1-208ENST00000482310 LRTM1Q9HBL6 345 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 NPHS2Q9NP85 383 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 SLC22A11Q9NSA0 550 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 FGFR1OP2Q9NVK5 253 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 NMRK1Q9NWW6 199 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 AHSPQ9NZD4 102 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 HAO1Q9UJM8 370 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 PADI1Q9ULC6 663 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 MRPS18BQ9Y676 258 aaKnown RBP12.52□□□□□ -0.41
HDAC1-208ENST00000482310 GNG14A0A1W2PPG7 69 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 OR2W5A6NFC9 320 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 FAM227AF5H4B4 570 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 CHST10O43529 356 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 TMPRSS11DO60235 418 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 PCDH7O60245 1069 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 DIAPH2O60879 1101 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 JRKO75564 520 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 RSL1D1O76021 490 aaKnown RBP12.51□□□□□ -0.41
HDAC1-208ENST00000482310 SEMA3DO95025 777 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 SNUPNO95149 360 aaKnown RBP12.51□□□□□ -0.41
HDAC1-208ENST00000482310 LIPCP11150 499 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 STAT5AP42229 794 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 XCR1P46094 333 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 SKP1P63208 163 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 GNGT1P63211 74 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 TBL3Q12788 808 aaKnown RBP12.51□□□□□ -0.41
HDAC1-208ENST00000482310 DSG2Q14126 1118 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 SLC9B1Q4ZJI4 515 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 VWA2Q5GFL6 755 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 CCNYL2Q5T2Q4 361 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 PRMT9Q6P2P2 845 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 Q6ZSR9 355 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 MAVSQ7Z434 540 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 TRIM46Q7Z4K8 759 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 LRRC34Q8IZ02 419 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 CA13Q8N1Q1 262 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 METTL4Q8N3J2 472 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 ENDOVQ8N8Q3 282 aaKnown RBP12.51□□□□□ -0.41
HDAC1-208ENST00000482310 FGF11Q92914 225 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 NKD1Q969G9 470 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 MVB12AQ96EY5 273 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 CSF3RQ99062 836 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 SPRY4Q9C004 299 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 FAM107BQ9H098 131 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 WDR55Q9H6Y2 383 aaPredicted RBP12.51□□□□□ -0.41
HDAC1-208ENST00000482310 RIC8BQ9NVN3 520 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 DCTN4Q9UJW0 460 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 USH1CQ9Y6N9 552 aa12.51□□□□□ -0.41
HDAC1-208ENST00000482310 PKD1L2Q7Z442 2459 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 A0A0A6YYD5 115 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 MYOCOSA0A1B0GUC4 107 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 H0YIG0 161 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 PSMD12O00232 456 aaPredicted RBP12.5□□□□□ -0.41
HDAC1-208ENST00000482310 SDHDO14521 159 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 LSM1O15116 133 aaKnown RBP12.5□□□□□ -0.41
HDAC1-208ENST00000482310 HDAC3O15379 428 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 EDF1O60869 148 aaKnown RBP12.5□□□□□ -0.41
HDAC1-208ENST00000482310 B4GALT2O60909 372 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 CNOT3O75175 753 aaKnown RBP12.5□□□□□ -0.41
HDAC1-208ENST00000482310 PIM1P11309 404 aaPredicted RBP12.5□□□□□ -0.41
HDAC1-208ENST00000482310 LIFP15018 202 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 TPP2P29144 1249 aaPredicted RBP12.5□□□□□ -0.41
HDAC1-208ENST00000482310 EPHA3P29320 983 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 TIA1P31483 386 aaKnown RBP eCLIP12.5□□□□□ -0.415e-11■■■□□ 18.9
HDAC1-208ENST00000482310 MAPK12P53778 367 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 LIM2P55344 173 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 HNRNPH2P55795 449 aaKnown RBP12.5□□□□□ -0.41
HDAC1-208ENST00000482310 RAE1P78406 368 aaKnown RBP12.5□□□□□ -0.41
HDAC1-208ENST00000482310 OCA2Q04671 838 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 DNASE1L3Q13609 305 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 NCF4Q15080 339 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 MINDY4Q4G0A6 757 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 ATP6AP1LQ52LC2 224 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 SPIN4Q56A73 249 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 XKR7Q5GH72 579 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 FAAH2Q6GMR7 532 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 RGS9BPQ6ZS82 235 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms