RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 TERF2Q15554 542 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 XKR6Q5GH73 641 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 UBAP2Q5T6F2 1119 aaKnown RBP12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 GRTP1Q5TC63 336 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 XKRXQ6PP77 449 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 RPTNQ6XPR3 784 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 SPPL2CQ8IUH8 684 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 CTAGE3PQ8IX95 158 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 SNX31Q8N9S9 440 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 SPATA4Q8NEY3 305 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 B3GNT7Q8NFL0 401 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 OR2L5Q8NG80 312 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 ITLN2Q8WWU7 325 aaPredicted RBP12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 MARVELD3Q96A59 401 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 ESAMQ96AP7 390 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 GPR22Q99680 433 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 CCDC77Q9BR77 488 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 TRIM45Q9H8W5 580 aaPredicted RBP12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 CHST11Q9NPF2 352 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 PNO1Q9NRX1 252 aaKnown RBP12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 CD274Q9NZQ7 290 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 FBXW2Q9UKT8 454 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 UTP11Q9Y3A2 253 aaKnown RBP12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 ASB1Q9Y576 335 aa12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 SPTBN1Q01082 2364 aaKnown RBP12.57□□□□□ -0.4
CTDSP1-208ENST00000482272 TCRBV9S1A1TA0A576 114 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 KLRC4-KLRK1H3BQV0 150 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 TGFBR3LH3BV60 316 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 NME2P1O60361 137 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 MYO1DO94832 1006 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 NME2P22392 152 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 KCNC1P48547 511 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 HSPA7P48741 367 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 SMSP52788 366 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 PLA2G16P53816 162 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 MTTPP55157 894 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 RAB10P61026 200 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 OR4D1Q15615 310 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 C3AR1Q16581 482 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 PDK4Q16654 411 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 ADPRMQ3LIE5 342 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 PAGE2BQ5JRK9 111 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 ZNF468Q5VIY5 522 aaPredicted RBP12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 ZDHHC24Q6UX98 284 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 VN1R5Q7Z5H4 357 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 TICAM1Q8IUC6 712 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 SCUBE1Q8IWY4 988 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 ZNF595Q8IYB9 648 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 ARMC10Q8N2F6 343 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 GHDCQ8N2G8 530 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 TMEM156Q8N614 296 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 SRFBP1Q8NEF9 429 aaKnown RBP12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 STAG3L4Q8TBR4 150 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 KIAA1191Q96A73 305 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 VMP1Q96GC9 406 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 UBXN10Q96LJ8 280 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 FRMD6Q96NE9 622 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 SERINC2Q96SA4 455 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 EFCAB11Q9BUY7 163 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 TSPAN10Q9H1Z9 355 aaPredicted RBP12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 COPS7BQ9H9Q2 264 aaPredicted RBP12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 PRM3Q9NNZ6 103 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 ZNF490Q9ULM2 529 aaPredicted RBP12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 RNF112Q9ULX5 631 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 ZNF835Q9Y2P0 537 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 KLF13Q9Y2Y9 288 aaPredicted RBP12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 CLDN16Q9Y5I7 305 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 CACNA1DQ01668 2161 aa12.56□□□□□ -0.4
CTDSP1-208ENST00000482272 TRBV11-1A0A0K0K1C0 115 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 FAM159BA6NKW6 160 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 CCNT2O60583 730 aaKnown RBP12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 ABOP16442 354 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 ZNF24P17028 368 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 EPORP19235 508 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 CD22P20273 847 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 CASQ1P31415 396 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 HNRNPFP52597 415 aaKnown RBP12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 PLTPP55058 493 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 IRF8Q02556 426 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 DLG1Q12959 904 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 DOC2AQ14183 400 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 EFTUD2Q15029 972 aaKnown RBP eCLIP12.55□□□□□ -0.45e-14■■■■■ 29.7
CTDSP1-208ENST00000482272 ABHD17CQ6PCB6 329 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 BNC2Q6ZN30 1099 aaPredicted RBP12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 Q6ZPB1 254 aaPredicted RBP12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 RAPH1Q70E73 1250 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 TMEM132CQ8N3T6 1108 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 CPSF7Q8N684 471 aaKnown RBP12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 POGLUT1Q8NBL1 392 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 APCDD1LQ8NCL9 501 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 PDPRQ8NCN5 879 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 TMEM52Q8NDY8 209 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 C7orf57Q8NEG2 295 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 UBE2E3Q969T4 207 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 WDR34Q96EX3 536 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 QRFPRQ96P65 431 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 CD244Q9BZW8 370 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 ROGDIQ9GZN7 287 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 RAB17Q9H0T7 212 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms