RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 PYHIN1Q6K0P9 492 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 ZSCAN25Q6NSZ9 544 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 SYT10Q6XYQ8 523 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 FRA10AC1Q70Z53 315 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 EIF3MQ7L2H7 374 aaKnown RBP3.9□□□□□ -1.79
VPS41-212ENST00000482217 PAGE2Q7Z2X7 111 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 NEK8Q86SG6 692 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 CYP4Z1Q86W10 505 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 LONP2Q86WA8 852 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 CHSY1Q86X52 802 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 ZNF575Q86XF7 245 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 PRIMA1Q86XR5 153 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 ARID3BQ8IVW6 561 aaPredicted RBP3.9□□□□□ -1.79
VPS41-212ENST00000482217 CCDC60Q8IWA6 550 aaPredicted RBP3.9□□□□□ -1.79
VPS41-212ENST00000482217 KLHDC8AQ8IYD2 350 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 C16orf71Q8IYS4 520 aaPredicted RBP3.9□□□□□ -1.79
VPS41-212ENST00000482217 APCDD1Q8J025 514 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 CADM3Q8N126 398 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 LRRC75A-AS1Q8N1F1 130 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 BOLLQ8N9W6 283 aaKnown RBP3.9□□□□□ -1.79
VPS41-212ENST00000482217 ZNF680Q8NEM1 530 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 OR5D13Q8NGL4 314 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 FAM81AQ8TBF8 368 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 ZNF398Q8TD17 642 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 GPX8Q8TED1 209 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 ATL1Q8WXF7 558 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 ING5Q8WYH8 240 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 PHYHIPQ92561 330 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 PIGKQ92643 395 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 MRGPRFQ96AM1 343 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 MCUR1Q96AQ8 359 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 MED30Q96HR3 178 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 ZFYVE19Q96K21 471 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 SLC29A1Q99808 456 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 FAM213AQ9BRX8 229 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 UBAC1Q9BSL1 405 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 FICDQ9BVA6 458 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 FRMD8Q9BZ67 464 aaPredicted RBP3.9□□□□□ -1.79
VPS41-212ENST00000482217 NDEL1Q9GZM8 345 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 HDHD2Q9H0R4 259 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 HIPK2Q9H2X6 1198 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 DPEP2Q9H4A9 486 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 MEAF6Q9HAF1 191 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 MAGEF1Q9HAY2 307 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 CHST11Q9NPF2 352 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 C8orf4Q9NR00 106 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 MAN2C1Q9NTJ4 1040 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.9□□□□□ -1.79
VPS41-212ENST00000482217 PTTG3PQ9NZH4 202 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 MTCH1Q9NZJ7 389 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 DBNLQ9UJU6 430 aaKnown RBP3.9□□□□□ -1.79
VPS41-212ENST00000482217 FOXA2Q9Y261 457 aaPredicted RBP3.9□□□□□ -1.79
VPS41-212ENST00000482217 B3GNT3Q9Y2A9 372 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 HEMK1Q9Y5R4 338 aaPredicted RBP3.9□□□□□ -1.79
VPS41-212ENST00000482217 PUS1Q9Y606 427 aaKnown RBP eCLIP3.9□□□□□ -1.79
VPS41-212ENST00000482217 ZNF541Q9H0D2 1346 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 A0A087WUV0 522 aaPredicted RBP3.89□□□□□ -1.79
VPS41-212ENST00000482217 A0A1B0GUA9 196 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 C1orf226A1L170 272 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 DPPA5A6NC42 116 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 GOLGA6L4A6NEF3 574 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 A8MUI8 341 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 USP17L23D6RBM5 183 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 GOLGA6L19H0YKK7 550 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 H3BMM5 538 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 H3BQV1 296 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 SMIM22K7EJ46 135 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 SDHDO14521 159 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 PTGESO14684 152 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 OGG1O15527 345 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 COCHO43405 550 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 GRID2O43424 1007 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 JAK2O60674 1132 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 LRP3O75074 770 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 ZNF217O75362 1048 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 UPK3AO75631 287 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 GPX5O75715 221 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 NEBLO76041 1014 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 PDE5AO76074 875 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 TMCC1O94876 653 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 ACSL3O95573 720 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 NUDT3O95989 172 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 GAS8O95995 478 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 KRT6AP02538 564 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 CYP2D6P10635 497 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 MLNP12872 115 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 CPA3P15088 417 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 CEBPBP17676 345 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 S1PR1P21453 382 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 TGM2P21980 687 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 PDHA2P29803 388 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 CD40LGP29965 261 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 HOXA9P31269 272 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 CHI3L1P36222 383 aaPredicted RBP3.89□□□□□ -1.79
VPS41-212ENST00000482217 ACADSBP45954 432 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 ATP5J2P56134 94 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 SLC37A1P57057 533 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 SEC61GP60059 68 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 UBE2G2P60604 165 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 RAB11AP62491 216 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms