RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 UBR5O95071 2799 aaPredicted RBP11.15□□□□□ -0.62
HMGN1-213ENST00000482192 OR5H15A6NDH6 313 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 TRIM49D1C9J1S8 452 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 E2F3O00716 465 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 CLDN4O14493 209 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 RIPK2O43353 540 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 UGDHO60701 494 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 WDPCPO95876 746 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 SNRPAP09012 282 aaKnown RBP11.15□□□□□ -0.62
HMGN1-213ENST00000482192 MYBL2P10244 700 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 CERS1P27544 350 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 HSD17B7P56937 341 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 RAB38P57729 211 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 SLC26A5P58743 744 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 TAS2R50P59544 299 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 SLC13A2Q13183 592 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 GTF2H2Q13888 395 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 UBAP2LQ14157 1087 aaKnown RBP11.15□□□□□ -0.62
HMGN1-213ENST00000482192 INAQ16352 499 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 ACER2Q5QJU3 275 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 LIPJQ5W064 366 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 RPUSD3Q6P087 351 aaKnown RBP11.15□□□□□ -0.62
HMGN1-213ENST00000482192 GTF2H2CQ6P1K8 395 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 CHSY3Q70JA7 882 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 ZNF595Q8IYB9 648 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 CYP4X1Q8N118 509 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 CNPY4Q8N129 248 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 SLC5A8Q8N695 610 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 AMER2Q8N7J2 671 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 OR1N1Q8NGS0 311 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 REPS1Q96D71 796 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 MTBPQ96DY7 904 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 CMTM7Q96FZ5 175 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 TBCDQ9BTW9 1192 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 MS4A8Q9BY19 250 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.15□□□□□ -0.62
HMGN1-213ENST00000482192 IPPKQ9H8X2 491 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 PRDM7Q9NQW5 492 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 ABI3Q9P2A4 366 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 XPR1Q9UBH6 696 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 DAPP1Q9UN19 280 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 NTNG1Q9Y2I2 539 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 TSC22D4Q9Y3Q8 395 aa11.15□□□□□ -0.62
HMGN1-213ENST00000482192 SYNDIG1LA6NDD5 238 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 SAGE2PA6NJ88 616 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 H0YIV9 168 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 STX16-NPEPL1H3BU86 382 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 STX16O14662 325 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 SMIM24O75264 130 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 SIX3O95343 332 aaPredicted RBP11.14□□□□□ -0.63
HMGN1-213ENST00000482192 F10P00742 488 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 PIK3CBP42338 1070 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 LIM2P55344 173 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 PHEXP78562 749 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 MRPL49Q13405 166 aaKnown RBP11.14□□□□□ -0.63
HMGN1-213ENST00000482192 DDX39BQ13838 428 aaKnown RBP11.14□□□□□ -0.63
HMGN1-213ENST00000482192 NR6A1Q15406 480 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 TERF2Q15554 542 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 MEP1AQ16819 746 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 KHDRBS2Q5VWX1 349 aaKnown RBP11.14□□□□□ -0.63
HMGN1-213ENST00000482192 FAM180AQ6UWF9 173 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 GOLGA7Q7Z5G4 137 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 UBE3DQ7Z6J8 389 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 CRLF3Q8IUI8 442 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 SCUBE1Q8IWY4 988 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 LGI4Q8N135 537 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 BEST3Q8N1M1 668 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 PTGR2Q8N8N7 351 aaPredicted RBP11.14□□□□□ -0.63
HMGN1-213ENST00000482192 EIF1ADQ8N9N8 165 aaKnown RBP11.14□□□□□ -0.63
HMGN1-213ENST00000482192 FAM47BQ8NA70 645 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 HUS1BQ8NHY5 278 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 SUN3Q8TAQ9 357 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 ELP5Q8TE02 316 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 GRHL3Q8TE85 626 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 SCYL1Q96KG9 808 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 MRPL57Q9BQC6 102 aaKnown RBP11.14□□□□□ -0.63
HMGN1-213ENST00000482192 CENPKQ9BS16 269 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 MRPL46Q9H2W6 279 aaKnown RBP11.14□□□□□ -0.63
HMGN1-213ENST00000482192 LYRM4Q9HD34 91 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 NECTIN3Q9NQS3 549 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 PRTFDC1Q9NRG1 225 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 ZNF358Q9NW07 568 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 FETUBQ9UGM5 382 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 PCDHGA11Q9Y5H2 935 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 SPACA6W5XKT8 324 aa11.14□□□□□ -0.63
HMGN1-213ENST00000482192 MYO18BQ8IUG5 2567 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 LRRC14BA6NHZ5 514 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 CYR61O00622 381 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 PRAMEF2O60811 474 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 SCELO95171 688 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 CBX6O95503 412 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 TGFB1P01137 390 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 FAM153BP0C7A2 387 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 HIST1H1TP22492 207 aaPredicted RBP11.13□□□□□ -0.63
HMGN1-213ENST00000482192 ATP5A1P25705 553 aaKnown RBP11.13□□□□□ -0.63
HMGN1-213ENST00000482192 GCAP28676 217 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 EEF1DP29692 281 aaKnown RBP11.13□□□□□ -0.63
HMGN1-213ENST00000482192 ARL1P40616 181 aaPredicted RBP11.13□□□□□ -0.63
HMGN1-213ENST00000482192 SSR2P43308 183 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 RAP1GDS1P52306 607 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms