RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 GTF2IRD2BQ6EKJ0 949 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 ZCCHC8Q6NZY4 707 aaKnown RBP13.81□□□□□ -0.2
CHD3-211ENST00000481999 ANGPTL8Q6UXH0 198 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 DGLUCYQ7Z3D6 616 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 GTF2IRD2Q86UP8 949 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 BPIFB6Q8NFQ5 453 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 OR52E1Q8NGJ3 308 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 ABTB1Q969K4 478 aaPredicted RBP13.81□□□□□ -0.2
CHD3-211ENST00000481999 BMFQ96LC9 184 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 MAGEB10Q96LZ2 347 aaPredicted RBP13.81□□□□□ -0.2
CHD3-211ENST00000481999 TBCCD1Q9NVR7 557 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 SAMD4AQ9UPU9 718 aaKnown RBP13.81□□□□□ -0.2
CHD3-211ENST00000481999 SNX5Q9Y5X3 404 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 U3KQV3 271 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 PRSS38A1L453 326 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 SLC16A6O15403 523 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 DNAJB5O75953 348 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 INHBBP09529 407 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 ERGP11308 486 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 GABRG2P18507 467 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 POU3F3P20264 500 aaPredicted RBP13.8□□□□□ -0.2
CHD3-211ENST00000481999 PTGER1P34995 402 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 MAGEA2P43356 314 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 HBA1P69905 142 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 BNIP3Q12983 259 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 LAPTM4AQ15012 233 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 CTU2Q2VPK5 515 aaKnown RBP13.8□□□□□ -0.2
CHD3-211ENST00000481999 TBC1D25Q3MII6 688 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 SPIN4Q56A73 249 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 PAGE2BQ5JRK9 111 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 KIAA1161Q6NSJ0 714 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 LCTLQ6UWM7 567 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 Q6ZNX1 250 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 TMEM179BQ7Z7N9 219 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 DCP2Q8IU60 420 aaKnown RBP13.8□□□□□ -0.2
CHD3-211ENST00000481999 OR8J2Q8NGG1 315 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.8□□□□□ -0.2
CHD3-211ENST00000481999 FAM131CQ96AQ9 280 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 CAMK1GQ96NX5 476 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 FCRL4Q96PJ5 515 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 TMEM168Q9H0V1 697 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 RHBDL2Q9NX52 303 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 FOXD2O60548 495 aaPredicted RBP13.8□□□□□ -0.2
CHD3-211ENST00000481999 MYO1DO94832 1006 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 CCNDBP1O95273 360 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 BCL10O95999 233 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 IL3P08700 152 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 ZNF182P17025 639 aaPredicted RBP13.8□□□□□ -0.2
CHD3-211ENST00000481999 RYKP34925 604 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 RAB15P59190 212 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 ISL1P61371 349 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 SNRPNP63162 240 aaKnown RBP13.8□□□□□ -0.2
CHD3-211ENST00000481999 ZNF763Q0D2J5 394 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 KRT33BQ14525 404 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 ZNF691Q5VV52 312 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 ADGRF3Q8IZF5 1079 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 FBXL6Q8N531 539 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 PATE1Q8WXA2 126 aa13.8□□□□□ -0.2
CHD3-211ENST00000481999 ZNF717Q9BY31 904 aaPredicted RBP13.8□□□□□ -0.2
CHD3-211ENST00000481999 EVPLLA8MZ36 301 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 OR1F1O43749 312 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 PRKRAO75569 313 aaKnown RBP13.79□□□□□ -0.2
CHD3-211ENST00000481999 DIRAS1O95057 198 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 C6orf47O95873 294 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 HTR1AP08908 422 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 HSD3B1P14060 373 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 FOSL2P15408 326 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 PRKACGP22612 351 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 HSD3B2P26439 372 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 TPP2P29144 1249 aaPredicted RBP13.79□□□□□ -0.2
CHD3-211ENST00000481999 PLA2G16P53816 162 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 C21orf59P57076 290 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 CCINQ13939 588 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 HIST2H2ACQ16777 129 aaPredicted RBP13.79□□□□□ -0.2
CHD3-211ENST00000481999 COX20Q5RI15 118 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.79□□□□□ -0.2
CHD3-211ENST00000481999 HIST2H2AA3Q6FI13 130 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 SHQ1Q6PI26 577 aaKnown RBP13.79□□□□□ -0.2
CHD3-211ENST00000481999 ZC3H7AQ8IWR0 971 aaKnown RBP13.79□□□□□ -0.2
CHD3-211ENST00000481999 PGBD3Q8N328 593 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 FAM160A2Q8N612 972 aaPredicted RBP13.79□□□□□ -0.2
CHD3-211ENST00000481999 OR2A1Q8NGT9 310 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 C16orf78Q8WTQ4 265 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 RLN3Q8WXF3 142 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 TANKQ92844 425 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 TBC1D20Q96BZ9 403 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 AICDAQ9GZX7 198 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 GPATCH2Q9NW75 528 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 SPASTQ9UBP0 616 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 RAPGEFL1Q9UHV5 662 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 TMEFF2Q9UIK5 374 aaPredicted RBP13.79□□□□□ -0.2
CHD3-211ENST00000481999 ICKQ9UPZ9 632 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 SNX11Q9Y5W9 270 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 FANCMQ8IYD8 2048 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 CCDC88CQ9P219 2028 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 CACNB4O00305 520 aaPredicted RBP13.79□□□□□ -0.2
CHD3-211ENST00000481999 CCDC159P0C7I6 412 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 ITGAMP11215 1152 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 PEBP1P30086 187 aaKnown RBP13.79□□□□□ -0.2
CHD3-211ENST00000481999 TRPC1P48995 793 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms