RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 A8MVM7 634 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 PI4K2BG5E9Z4 385 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 PGRMC2O15173 223 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 CLDN1O95832 211 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 C8orf89P0DMQ9 161 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 CD59P13987 128 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 TYMPP19971 482 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 CYP2A7P20853 494 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 HLA-FP30511 346 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 DUTP33316 252 aaKnown RBP3.31□□□□□ -1.88
CBX3-207ENST00000481300 MMP12P39900 470 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 IER3P46695 156 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 XGP55808 180 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 ST8SIA6P61647 398 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 ABRQ12979 859 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 SLMAPQ14BN4 828 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 PPA1Q15181 289 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 TAB1Q15750 504 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 MTHFSDQ2M296 383 aaKnown RBP3.31□□□□□ -1.88
CBX3-207ENST00000481300 CEP85LQ5SZL2 805 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 LINC00696Q6ZRV3 163 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 TOM1L2Q6ZVM7 507 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 PIWIL3Q7Z3Z3 882 aaKnown RBP3.31□□□□□ -1.88
CBX3-207ENST00000481300 CLYBLQ8N0X4 340 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 NUP93Q8N1F7 819 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 NXPE2Q96DL1 559 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 USP28Q96RU2 1077 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 KRT12Q99456 494 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 DESI2Q9BSY9 194 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 PI4K2AQ9BTU6 479 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 MMADHCQ9H3L0 296 aaPredicted RBP3.31□□□□□ -1.88
CBX3-207ENST00000481300 DPEP2Q9H4A9 486 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 SRD5A3Q9H8P0 318 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 SPHK2Q9NRA0 654 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 FBXL4Q9UKA2 621 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 PILRBQ9UKJ0 227 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 GPR132Q9UNW8 380 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 LIPT1Q9Y234 373 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 EXOGQ9Y2C4 368 aaKnown RBP3.31□□□□□ -1.88
CBX3-207ENST00000481300 LTBP4Q8N2S1 1624 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 PXDNQ92626 1479 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 A0A087X002 238 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 MTMR11A4FU01 709 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 ZNF263O14978 683 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 HTATSF1O43719 755 aaKnown RBP3.3□□□□□ -1.88
CBX3-207ENST00000481300 KIF5CO60282 957 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 ZNF821O75541 412 aaPredicted RBP3.3□□□□□ -1.88
CBX3-207ENST00000481300 GH1P01241 217 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 IGHEP01854 428 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 DLATP10515 647 aaKnown RBP3.3□□□□□ -1.88
CBX3-207ENST00000481300 HSPA1LP34931 641 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 OPRL1P41146 370 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 SOX3P41225 446 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 FRKP42685 505 aaPredicted RBP3.3□□□□□ -1.88
CBX3-207ENST00000481300 SNU13P55769 128 aaKnown RBP3.3□□□□□ -1.88
CBX3-207ENST00000481300 HILS1P60008 231 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 CSNK2BP67870 215 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 AKAP17AQ02040 695 aaKnown RBP3.3□□□□□ -1.88
CBX3-207ENST00000481300 SRSF9Q13242 221 aaKnown RBP eCLIP3.3□□□□□ -1.88
CBX3-207ENST00000481300 ARMCX4Q5H9R4 360 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 C1QTNF12Q5T7M4 302 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 ATP1A1-AS1Q5TC04 95 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 KLHL10Q6JEL2 608 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 ZNF530Q6P9A1 599 aaPredicted RBP3.3□□□□□ -1.88
CBX3-207ENST00000481300 CCDC170Q8IYT3 715 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 ZNF614Q8N883 585 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.3□□□□□ -1.88
CBX3-207ENST00000481300 OR4D10Q8NGI6 311 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 FIBINQ8TAL6 211 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 C2orf48Q96LS8 159 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 NEDD4LQ96PU5 975 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 IL12RB2Q99665 862 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 C17orf62Q9BQA9 187 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 THUMPD2Q9BTF0 503 aaKnown RBP3.3□□□□□ -1.88
CBX3-207ENST00000481300 IDI2Q9BXS1 227 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 FUT8Q9BYC5 575 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 C2orf40Q9H1Z8 148 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 ALDH8A1Q9H2A2 487 aaPredicted RBP3.3□□□□□ -1.88
CBX3-207ENST00000481300 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.3□□□□□ -1.88
CBX3-207ENST00000481300 DNAJC17Q9NVM6 304 aaKnown RBP3.3□□□□□ -1.88
CBX3-207ENST00000481300 BARHL2Q9NY43 387 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 HBS1LQ9Y450 684 aaKnown RBP3.3□□□□□ -1.88
CBX3-207ENST00000481300 PCDHGA1Q9Y5H4 931 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 CSNK1G3Q9Y6M4 447 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 MYOM1P52179 1685 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 USP32Q8NFA0 1604 aa3.3□□□□□ -1.88
CBX3-207ENST00000481300 IGLV7-46A0A075B6I9 117 aa3.29□□□□□ -1.88
CBX3-207ENST00000481300 C2orf92A0A1B0GVN3 265 aa3.29□□□□□ -1.88
CBX3-207ENST00000481300 SURF4O15260 269 aa3.29□□□□□ -1.88
CBX3-207ENST00000481300 ARHGEF9O43307 516 aa3.29□□□□□ -1.88
CBX3-207ENST00000481300 SCO2O43819 266 aa3.29□□□□□ -1.88
CBX3-207ENST00000481300 SAP30O75446 220 aa3.29□□□□□ -1.88
CBX3-207ENST00000481300 GOT1P17174 413 aa3.29□□□□□ -1.88
CBX3-207ENST00000481300 PRKACGP22612 351 aa3.29□□□□□ -1.88
CBX3-207ENST00000481300 OR3A1P47881 315 aa3.29□□□□□ -1.88
CBX3-207ENST00000481300 HUNKP57058 714 aa3.29□□□□□ -1.88
CBX3-207ENST00000481300 ERVK11-1P61568 191 aa3.29□□□□□ -1.88
CBX3-207ENST00000481300 RPP38P78345 283 aaKnown RBP3.29□□□□□ -1.88
CBX3-207ENST00000481300 ASIC1P78348 528 aa3.29□□□□□ -1.88
CBX3-207ENST00000481300 CYCSP99999 105 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms