RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 SLC16A6O15403 523 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 TGM5O43548 720 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 HS6ST1O60243 411 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 UGT2B11O75310 529 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 PSIP1O75475 530 aaKnown RBP4.75□□□□□ -1.65
SF3B6-202ENST00000478050 EPN2O95208 641 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 SERPINA1P01009 418 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 CATP04040 527 aaKnown RBP4.75□□□□□ -1.65
SF3B6-202ENST00000478050 UGT2B4P06133 528 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 CCDC159P0C7I6 412 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 PABPC1P11940 636 aaKnown RBP4.75□□□□□ -1.65
SF3B6-202ENST00000478050 ITIH1P19827 911 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 CCNA2P20248 432 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 PPIBP23284 216 aaKnown RBP4.75□□□□□ -1.65
SF3B6-202ENST00000478050 CRHBPP24387 322 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 RPL10P27635 214 aaKnown RBP4.75□□□□□ -1.65
SF3B6-202ENST00000478050 ELK4P28324 431 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 PTPN6P29350 595 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 HLA-FP30511 346 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 RYKP34925 604 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 DCTP40126 519 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 HNF4AP41235 474 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 HALP42357 657 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 MAGEA2P43356 314 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 ASMTP46597 345 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 RXRGP48443 463 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 GALK1P51570 392 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 CCR3P51677 355 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 ARHGDIAP52565 204 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 PHC1P78364 1004 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 IRF8Q02556 426 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 LRRC74AQ0VAA2 488 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 HSPA14Q0VDF9 509 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 CHIT1Q13231 466 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 KCNAB2Q13303 367 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 KEAP1Q14145 624 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 NEDD8Q15843 81 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 PGS1Q32NB8 556 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 GTDC1Q4AE62 458 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 LDLRAP1Q5SW96 308 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 C6orf141Q5SZD1 244 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF691Q5VV52 312 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 GPR107Q5VW38 600 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 CPZQ66K79 652 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 OR4F3Q6IEY1 312 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 GRHL2Q6ISB3 625 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 CES5AQ6NT32 575 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 NOXRED1Q6NXP6 359 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 NEK5Q6P3R8 708 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 DOK6Q6PKX4 331 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 SPESP1Q6UW49 350 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 DPY19L3Q6ZPD9 716 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 R3HCC1LQ7Z5L2 792 aaKnown RBP4.75□□□□□ -1.65
SF3B6-202ENST00000478050 TSPYL5Q86VY4 417 aaPredicted RBP4.75□□□□□ -1.65
SF3B6-202ENST00000478050 SYT12Q8IV01 421 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 ZDHHC21Q8IVQ6 265 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 MRPL41Q8IXM3 137 aaKnown RBP4.75□□□□□ -1.65
SF3B6-202ENST00000478050 CMTM8Q8IZV2 173 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 CPA6Q8N4T0 437 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 TRAM1L1Q8N609 369 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 FAM86B1Q8N7N1 296 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 ARL10Q8N8L6 244 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 DRAXINQ8NBI3 349 aaPredicted RBP4.75□□□□□ -1.65
SF3B6-202ENST00000478050 SYT8Q8NBV8 401 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 CHDHQ8NE62 594 aaPredicted RBP4.75□□□□□ -1.65
SF3B6-202ENST00000478050 DDHD1Q8NEL9 900 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 OR8J2Q8NGG1 315 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 FAM81AQ8TBF8 368 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 HCAR2Q8TDS4 363 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 RAB2BQ8WUD1 216 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 SKA2Q8WVK7 121 aaPredicted RBP4.75□□□□□ -1.65
SF3B6-202ENST00000478050 ELMO1Q92556 727 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 KISS1RQ969F8 398 aaPredicted RBP4.75□□□□□ -1.65
SF3B6-202ENST00000478050 BORCS5Q969J3 196 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF566Q969W8 418 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 VOPP1Q96AW1 172 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 MTFMTQ96DP5 389 aaKnown RBP4.75□□□□□ -1.65
SF3B6-202ENST00000478050 APIPQ96GX9 242 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 APOLD1Q96LR9 279 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 CCDC138Q96M89 665 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 CLUHP3Q96NS8 147 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 TSSK3Q96PN8 268 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 BCL7BQ9BQE9 202 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 HEPHQ9BQS7 1158 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 INPP5KQ9BT40 448 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 ZSCAN5AQ9BUG6 496 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 ASPSCR1Q9BZE9 553 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 MKRN2Q9H000 416 aaKnown RBP4.75□□□□□ -1.65
SF3B6-202ENST00000478050 ADNPQ9H2P0 1102 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 FAM83DQ9H4H8 585 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 GPN2Q9H9Y4 310 aaPredicted RBP4.75□□□□□ -1.65
SF3B6-202ENST00000478050 LIN28AQ9H9Z2 209 aaKnown RBP4.75□□□□□ -1.65
SF3B6-202ENST00000478050 CERS4Q9HA82 394 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 SMURF2Q9HAU4 748 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 BRF2Q9HAW0 419 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 FANCEQ9HB96 536 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 TM9SF3Q9HD45 589 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 PALMDQ9NP74 551 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 ASAH2Q9NR71 780 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 TBC1D23Q9NUY8 699 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms