RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 AP4S1Q9Y587 144 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 BDP1A6H8Y1 2624 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 CACNA1EQ15878 2313 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 CD38P28907 300 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 MAP3K8P41279 467 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 VEZF1Q14119 521 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 ENPP6Q6UWR7 440 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 DGLUCYQ7Z3D6 616 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.51□□□□□ -0.577e-10■■■□□ 15.3
PRPF39-203ENST00000477626 MICU2Q8IYU8 434 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 OR4E2Q8NGC2 313 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 GFM2Q969S9 779 aaKnown RBP11.51□□□□□ -0.57
PRPF39-203ENST00000477626 SLC29A1Q99808 456 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 ENTPD2Q9Y5L3 495 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 FREM2Q5SZK8 3169 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 A0A1W2PS29 197 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 FITM1A5D6W6 292 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 OR5K4A6NMS3 321 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 PRAMEF10O60809 474 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 CCNDBP1O95273 360 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 HIST1H1TP22492 207 aaPredicted RBP11.51□□□□□ -0.57
PRPF39-203ENST00000477626 CTSKP43235 329 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 RPS15AP62244 130 aaKnown RBP11.51□□□□□ -0.57
PRPF39-203ENST00000477626 UBXN2BQ14CS0 331 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 SLC25A45Q8N413 288 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 NEURL3Q96EH8 262 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 THAP11Q96EK4 314 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 C7orf34Q96L11 122 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 KLHL20Q9Y2M5 609 aa11.51□□□□□ -0.57
PRPF39-203ENST00000477626 MRPS2Q9Y399 296 aaKnown RBP11.51□□□□□ -0.57
PRPF39-203ENST00000477626 ARID1BQ8NFD5 2236 aaPredicted RBP11.51□□□□□ -0.57
PRPF39-203ENST00000477626 LOC105369274A0A096LPK9 316 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 LOC102723532A0A0G2JNH3 316 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 NUDT7P0C024 238 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 PCGF2P35227 344 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 HIST2H2ACQ16777 129 aaPredicted RBP11.5□□□□□ -0.57
PRPF39-203ENST00000477626 CPTPQ5TA50 214 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 HIST2H2AA3Q6FI13 130 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 PPP4R4Q6NUP7 873 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 CYP2R1Q6VVX0 501 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 PIWIL3Q7Z3Z3 882 aaKnown RBP11.5□□□□□ -0.57
PRPF39-203ENST00000477626 OR4N4Q8N0Y3 316 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 RGMAQ96B86 450 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 ACSS1Q9NUB1 689 aaPredicted RBP11.5□□□□□ -0.57
PRPF39-203ENST00000477626 HCN4Q9Y3Q4 1203 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 NVLO15381 856 aaKnown RBP11.5□□□□□ -0.57
PRPF39-203ENST00000477626 DCNP07585 359 aaKnown RBP11.5□□□□□ -0.57
PRPF39-203ENST00000477626 ENGP17813 658 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 PXNP49023 591 aaPredicted RBP11.5□□□□□ -0.57
PRPF39-203ENST00000477626 VAC14Q08AM6 782 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 PRTGQ2VWP7 1150 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 TBPL2Q6SJ96 375 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 MIPOL1Q8TD10 442 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 KLHDC7BQ96G42 594 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 TRAPPC9Q96Q05 1148 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 MACROD1Q9BQ69 325 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 FAM60AQ9NP50 221 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 UCKL1Q9NWZ5 548 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 SNX7Q9UNH6 387 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 ATG4BQ9Y4P1 393 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 PCDHGA2Q9Y5H1 932 aa11.5□□□□□ -0.57
PRPF39-203ENST00000477626 DHRS12A0PJE2 317 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 LMO7DNF2Z398 122 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 SOCS2O14508 198 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 OR1F1O43749 312 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 LIMS1P48059 325 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 RXRGP48443 463 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 ZNF542PQ5EBM4 170 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 USP51Q70EK9 711 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 ZNF605Q86T29 641 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 CLEC4FQ8N1N0 589 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 CNRIP1Q96F85 164 aaPredicted RBP11.49□□□□□ -0.57
PRPF39-203ENST00000477626 BTBD9Q96Q07 612 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 TMEM121BQ9BXQ6 578 aaPredicted RBP11.49□□□□□ -0.57
PRPF39-203ENST00000477626 RMND5AQ9H871 391 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 DSPPQ9NZW4 1301 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 WASHC1A8K0Z3 465 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 CLIC1O00299 241 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 CYR61O00622 381 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 RFXANKO14593 260 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 C9P02748 559 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 MSL3P1P0C860 447 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 COX7A2P14406 83 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 HPCAL1P37235 193 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 KCNJ10P78508 379 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 DDX39BQ13838 428 aaKnown RBP11.49□□□□□ -0.57
PRPF39-203ENST00000477626 ANXA8L1Q5VT79 327 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 GLYATQ6IB77 296 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 UGT2A3Q6UWM9 527 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 TRIM73Q86UV7 250 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 CHERPQ8IWX8 916 aaKnown RBP11.49□□□□□ -0.57
PRPF39-203ENST00000477626 OR2T12Q8NG77 320 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 ZDHHC1Q8WTX9 485 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 ZC3H10Q96K80 434 aaKnown RBP11.49□□□□□ -0.57
PRPF39-203ENST00000477626 ZBTB18Q99592 522 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 COPS7BQ9H9Q2 264 aaPredicted RBP11.49□□□□□ -0.57
PRPF39-203ENST00000477626 VNN3Q9NY84 501 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 UBAP1Q9NZ09 502 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 SIT1Q9Y3P8 196 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 AKAP10O43572 662 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms