RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PCDH1Q08174 1060 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 ILF3Q12906 894 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 NFATC3Q12968 1075 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 GNA13Q14344 377 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 TSTQ16762 297 aaKnown RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 RPS26P11Q5JNZ5 115 aaPredicted RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 REEP3Q6NUK4 255 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 FAM131AQ6UXB0 335 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF438Q7Z4V0 828 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 SNX29P2Q8IUI4 249 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 WDR48Q8TAF3 677 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 COG8Q96MW5 612 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 TMEM121BQ9BXQ6 578 aaPredicted RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 MS4A12Q9NXJ0 267 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 TUBA8Q9NY65 449 aaPredicted RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF225Q9UK10 706 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 IRAK3Q9Y616 596 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 ATAD5Q96QE3 1844 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 SLC35F4A4IF30 521 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 SCAMP2O15127 329 aaKnown RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 NUAK1O60285 661 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 KAT7O95251 611 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 CCDC159P0C7I6 412 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 CDK4P11802 303 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 ADRB3P13945 408 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 HOXB6P17509 224 aaKnown RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 SRP54P61011 504 aaKnown RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 SLC14A2Q15849 920 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 OR4N5Q8IXE1 308 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF548Q8NEK5 533 aaPredicted RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 PDLIM5Q96HC4 596 aaKnown RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 DIRAS2Q96HU8 199 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 PRDM8Q9NQV8 689 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 GPR83Q9NYM4 423 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 HCFC2Q9Y5Z7 792 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 SPIN1Q9Y657 262 aaPredicted RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 TSPAN12O95859 305 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 RPLP0P05388 317 aaKnown RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 CSNK2A2P19784 350 aaPredicted RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 MAGEA10P43363 369 aaPredicted RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 SUOXP51687 545 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 COPZ1P61923 177 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 SFSWAPQ12872 951 aaKnown RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF829Q3KNS6 432 aaPredicted RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 SPATS1Q496A3 300 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 CRTC2Q53ET0 693 aaPredicted RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 MPP7Q5T2T1 576 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 PPP2R2DQ66LE6 453 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 MRPL43Q8N983 215 aaKnown RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 SRFBP1Q8NEF9 429 aaKnown RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 OR8K5Q8NH50 307 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 GPR151Q8TDV0 419 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 UBE2FQ969M7 185 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 NPLQ9BXD5 320 aaPredicted RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 RBCK1Q9BYM8 510 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 CLMPQ9H6B4 373 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 TMEM165Q9HC07 324 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF624Q9P2J8 865 aaPredicted RBP10.58□□□□□ -0.72
COL27A1-204ENST00000477421 IL20RAQ9UHF4 553 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 HCN4Q9Y3Q4 1203 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 COLEC10Q9Y6Z7 277 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 SMIM18P0DKX4 95 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 PIM1P11309 404 aaPredicted RBP10.57□□□□□ -0.72
COL27A1-204ENST00000477421 TYRP1P17643 537 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 DDX6P26196 483 aaKnown RBP eCLIP10.57□□□□□ -0.72
COL27A1-204ENST00000477421 TPTEP56180 551 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 SLC7A9P82251 487 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 VLDLRP98155 873 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 KRR1Q13601 381 aaKnown RBP10.57□□□□□ -0.72
COL27A1-204ENST00000477421 MYBPC3Q14896 1274 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 RGNQ15493 299 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 CDC73Q6P1J9 531 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 MFSD2AQ8NA29 543 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 HMGCLL1Q8TB92 370 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 DPH7Q9BTV6 452 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 RC3H2Q9HBD1 1191 aaKnown RBP10.57□□□□□ -0.72
COL27A1-204ENST00000477421 GIN1Q9NXP7 522 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 FAM92AA1XBS5 289 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 URADA6NGE7 173 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 BOLA2-SMG1P6H3BVE0 249 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 TLR4O00206 839 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 TIMP1P01033 207 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 ALAS2P22557 587 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 MPIP34949 423 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 GSTM4Q03013 218 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 STX4Q12846 297 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF630Q2M218 657 aaPredicted RBP10.57□□□□□ -0.72
COL27A1-204ENST00000477421 NXPE4Q6UWF7 544 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 GOLM1Q8NBJ4 401 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF671Q8TAW3 534 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF689Q96CS4 500 aaPredicted RBP10.57□□□□□ -0.72
COL27A1-204ENST00000477421 EID2BQ96D98 161 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 P2RY12Q9H244 342 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 SERHL2Q9H4I8 314 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 SERHLQ9NQF3 203 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 CRNNQ9UBG3 495 aaPredicted RBP10.57□□□□□ -0.72
COL27A1-204ENST00000477421 POFUT2Q9Y2G5 429 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 H7C0S8 307 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 SLC22A1O15245 554 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 ALPLP05186 524 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms