RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 WWOXQ9NZC7 414 aa2.74□□□□□ -1.97
HMGN4-202ENST00000477243 PLA2G2EQ9NZK7 142 aa2.74□□□□□ -1.97
HMGN4-202ENST00000477243 COPS7AQ9UBW8 275 aa2.74□□□□□ -1.97
HMGN4-202ENST00000477243 GAGE2DQ9UEU5 116 aa2.74□□□□□ -1.97
HMGN4-202ENST00000477243 NDRG3Q9UGV2 375 aa2.74□□□□□ -1.97
HMGN4-202ENST00000477243 BCAP29Q9UHQ4 241 aa2.74□□□□□ -1.97
HMGN4-202ENST00000477243 NIP7Q9Y221 180 aaKnown RBP eCLIP2.74□□□□□ -1.97
HMGN4-202ENST00000477243 CBY1Q9Y3M2 126 aa2.74□□□□□ -1.97
HMGN4-202ENST00000477243 NR2E1Q9Y466 385 aa2.74□□□□□ -1.97
HMGN4-202ENST00000477243 ATP6V1DQ9Y5K8 247 aa2.74□□□□□ -1.97
HMGN4-202ENST00000477243 SBF2Q86WG5 1849 aa2.74□□□□□ -1.97
HMGN4-202ENST00000477243 COL12A1Q99715 3063 aa2.74□□□□□ -1.97
HMGN4-202ENST00000477243 AKAP11Q9UKA4 1901 aa2.74□□□□□ -1.97
HMGN4-202ENST00000477243 DOPEY2Q9Y3R5 2298 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 LRRIQ1Q96JM4 1722 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 FMN2Q9NZ56 1722 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 TRAV6A0A075B6T7 132 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 A0A0U1RRA0 63 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ESYT2A0FGR8 921 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ARHGEF35A5YM69 484 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 TMEM202A6NGA9 273 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ANKRD61A6NGH8 418 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 PRR19A6NJB7 356 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 HSPB2A8KAH6 182 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 IQCF5A8MTL0 148 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 WASH3PC4AMC7 463 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 C9JVG2 144 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 GOLGA8TH3BQL2 631 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 PDXKO00764 312 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SLC16A5O15375 505 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SUV39H1O43463 412 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 RNF13O43567 381 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SCO2O43819 266 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 PRAMEF2O60811 474 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 PRAF2O60831 178 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ZNF217O75362 1048 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 BCAS1O75363 584 aaPredicted RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 STC2O76061 302 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 NXPH3O95157 252 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ACSL3O95573 720 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 NFATC1O95644 943 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SNAI1O95863 264 aaPredicted RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 IGHV2-70P01814 119 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 LCKP06239 509 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ZNF888P0CJ79 500 aaPredicted RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 NR2F6P10588 404 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 UMPSP11172 480 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 GNSP15586 552 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 EPCAMP16422 314 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SRD5A1P18405 259 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 PSMA2P25787 234 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 CHATP28329 748 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 RRM2P31350 389 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 CA8P35219 290 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ATP5C1P36542 298 aaKnown RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 NBL1P41271 181 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SLC6A8P48029 635 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ACADVLP49748 655 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 RAB9AP51151 201 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 PLCD1P51178 756 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ZNF84P51523 738 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 TPTEP56180 551 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 NXPH1P58417 271 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 NLRP11P59045 1033 aaKnown RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SELENOVP59797 346 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 MBTD1Q05BQ5 628 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ILF2Q12905 390 aaKnown RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 TRAP1Q12931 704 aaKnown RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 NME3Q13232 169 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 DMP1Q13316 513 aaPredicted RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 XRCC4Q13426 336 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 MESDQ14696 234 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 HSPB2Q16082 182 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 STX1AQ16623 288 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SGSM1Q2NKQ1 1148 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 FAM214AQ32MH5 1076 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 LBHQ53QV2 105 aaPredicted RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 RABGAP1LQ5R372 815 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 TREML2Q5T2D2 321 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 FAM102AQ5T9C2 384 aaPredicted RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 TTC23Q5W5X9 447 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 GGNBP1Q5YKI7 109 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 HIST2H2AA3Q6FI13 130 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 PTRHD1Q6GMV3 140 aaKnown RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SNRNP48Q6IEG0 339 aaKnown RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 CBLN3Q6UW01 205 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SCARA5Q6ZMJ2 495 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 KDM7AQ6ZMT4 941 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 CENPUQ71F23 418 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 EIF3MQ7L2H7 374 aaKnown RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SSX9Q7RTT3 188 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 GDF7Q7Z4P5 450 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 TECPR1Q7Z6L1 1165 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 KIAA1328Q86T90 577 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ZC3HC1Q86WB0 502 aaKnown RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ADGRG3Q86Y34 549 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 C1orf210Q8IVY1 113 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SFTPA1Q8IWL2 248 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 STHQ8IWL8 128 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SLC35F3Q8IY50 421 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms