RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SCARB2Q14108 478 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 CTF1Q16619 201 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 PRAMEF14Q5SWL7 426 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 SYT6Q5T7P8 510 aaPredicted RBP15.74■□□□□ 0.11
TMEM53-208ENST00000476724 PRAMEF13Q5VWM6 474 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 TMIGD1Q6UXZ0 262 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 Q6ZNX1 250 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 ERN2Q76MJ5 926 aaKnown RBP15.74■□□□□ 0.11
TMEM53-208ENST00000476724 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.74■□□□□ 0.11
TMEM53-208ENST00000476724 NATD1Q8N6N6 113 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 SPPL2AQ8TCT8 520 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 RAB7BQ96AH8 199 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 NECTIN3Q9NQS3 549 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 THSD1Q9NS62 852 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 H3BQ06 376 aaPredicted RBP15.73■□□□□ 0.11
TMEM53-208ENST00000476724 TNFRSF11BO00300 401 aa15.73■□□□□ 0.11
TMEM53-208ENST00000476724 SLC22A1O15245 554 aa15.73■□□□□ 0.11
TMEM53-208ENST00000476724 FAM20BO75063 409 aa15.73■□□□□ 0.11
TMEM53-208ENST00000476724 IGFBP4P22692 258 aa15.73■□□□□ 0.11
TMEM53-208ENST00000476724 AQP1P29972 269 aa15.73■□□□□ 0.11
TMEM53-208ENST00000476724 TAS2R50P59544 299 aa15.73■□□□□ 0.11
TMEM53-208ENST00000476724 NFE2L1Q14494 772 aa15.73■□□□□ 0.11
TMEM53-208ENST00000476724 CYP2A13Q16696 494 aa15.73■□□□□ 0.11
TMEM53-208ENST00000476724 CRB2Q5IJ48 1285 aa15.73■□□□□ 0.11
TMEM53-208ENST00000476724 PRSS48Q7RTY5 328 aa15.73■□□□□ 0.11
TMEM53-208ENST00000476724 DSG4Q86SJ6 1040 aa15.73■□□□□ 0.11
TMEM53-208ENST00000476724 PLEKHA8Q96JA3 519 aa15.73■□□□□ 0.11
TMEM53-208ENST00000476724 OR52A5Q9H2C5 316 aa15.73■□□□□ 0.11
TMEM53-208ENST00000476724 NDUFAF4Q9P032 175 aa15.73■□□□□ 0.11
TMEM53-208ENST00000476724 ICKQ9UPZ9 632 aa15.73■□□□□ 0.11
TMEM53-208ENST00000476724 ASF1AQ9Y294 204 aa15.73■□□□□ 0.11
TMEM53-208ENST00000476724 LYVE1Q9Y5Y7 322 aa15.73■□□□□ 0.11
TMEM53-208ENST00000476724 A0A1W2PRB8 838 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 K7EQS6 105 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 KLK1P06870 262 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 ETFAP13804 333 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 CD6P30203 668 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 HSD17B2P37059 387 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 ARHGAP19Q14CB8 494 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 COX20Q5RI15 118 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 PDZD3Q86UT5 571 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 FAM124AQ86V42 546 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 DCUN1D3Q8IWE4 304 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 WDR48Q8TAF3 677 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 CXorf40AQ8TE69 158 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 C1QTNF3-AMACRE9PGA6 284 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 KLHL18O94889 574 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 RPN2P04844 631 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 DDX5P17844 614 aaKnown RBP15.72■□□□□ 0.11
TMEM53-208ENST00000476724 CXCR2P25025 360 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 TIE1P35590 1138 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 CHI3L1P36222 383 aaPredicted RBP15.72■□□□□ 0.11
TMEM53-208ENST00000476724 ST13P50502 369 aaKnown RBP15.72■□□□□ 0.11
TMEM53-208ENST00000476724 MC1RQ01726 317 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 AQP6Q13520 282 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 COL19A1Q14993 1142 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 SPCS2Q15005 226 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 MPEG1Q2M385 716 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 MLIPQ5VWP3 458 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 ZNF852Q6ZMS4 543 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 MTSS1LQ765P7 747 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 C11orf96Q7Z7L8 435 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 FAM129CQ86XR2 697 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 ZNF513Q8N8E2 541 aaPredicted RBP15.72■□□□□ 0.11
TMEM53-208ENST00000476724 B3GNT3Q9Y2A9 372 aa15.72■□□□□ 0.11
TMEM53-208ENST00000476724 DNMT3AQ9Y6K1 912 aaPredicted RBP15.72■□□□□ 0.11
TMEM53-208ENST00000476724 COL4A2P08572 1712 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 ANHXE9PGG2 379 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 SAP18O00422 153 aaKnown RBP15.71■□□□□ 0.11
TMEM53-208ENST00000476724 SEMA3DO95025 777 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 GBAP04062 536 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 P2RY2P41231 377 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 KIR2DL1P43626 348 aaPredicted RBP15.71■□□□□ 0.11
TMEM53-208ENST00000476724 CDK6Q00534 326 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 OCA2Q04671 838 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 EEF1A2Q05639 463 aaKnown RBP15.71■□□□□ 0.11
TMEM53-208ENST00000476724 CNTN1Q12860 1018 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 C16orf87Q6PH81 154 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 ADAMTSL4Q6UY14 1074 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 TSEN54Q7Z6J9 526 aaKnown RBP15.71■□□□□ 0.11
TMEM53-208ENST00000476724 SLC9B2Q86UD5 537 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 AMZ2Q86W34 360 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 P3H2Q8IVL5 708 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 CIDECQ96AQ7 238 aaPredicted RBP15.71■□□□□ 0.11
TMEM53-208ENST00000476724 YIPF6Q96EC8 236 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 COX14Q96I36 57 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 ZNF300Q96RE9 604 aaPredicted RBP15.71■□□□□ 0.11
TMEM53-208ENST00000476724 HDAC8Q9BY41 377 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 SPNS1Q9H2V7 528 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 RHBGQ9H310 441 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 PELI2Q9HAT8 420 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 MIEF1Q9NQG6 463 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 PLCXD1Q9NUJ7 323 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 FAIMQ9NVQ4 179 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 ANGPT4Q9Y264 503 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 POFUT2Q9Y2G5 429 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 DOCK9Q9BZ29 2069 aa15.71■□□□□ 0.11
TMEM53-208ENST00000476724 hCG_2014768A0A024R1R8 64 aa15.71■□□□□ 0.1
TMEM53-208ENST00000476724 TBX19O60806 448 aa15.71■□□□□ 0.1
TMEM53-208ENST00000476724 UQCRC2P22695 453 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms