RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 UGT3A2Q3SY77 523 aa14.83□□□□□ -0.04
CPSF3-203ENST00000475482 C10orf62Q5T681 223 aaPredicted RBP14.83□□□□□ -0.04
CPSF3-203ENST00000475482 THEMIS2Q5TEJ8 643 aa14.83□□□□□ -0.04
CPSF3-203ENST00000475482 VWA5B1Q5TIE3 1220 aa14.83□□□□□ -0.04
CPSF3-203ENST00000475482 ICE2Q659A1 982 aa14.83□□□□□ -0.04
CPSF3-203ENST00000475482 NXNQ6DKJ4 435 aa14.83□□□□□ -0.04
CPSF3-203ENST00000475482 MAVSQ7Z434 540 aa14.83□□□□□ -0.04
CPSF3-203ENST00000475482 PPP1R32Q7Z5V6 425 aa14.83□□□□□ -0.04
CPSF3-203ENST00000475482 MTDHQ86UE4 582 aaKnown RBP14.83□□□□□ -0.04
CPSF3-203ENST00000475482 PAQR7Q86WK9 346 aa14.83□□□□□ -0.04
CPSF3-203ENST00000475482 ARHGEF39Q8N4T4 335 aa14.83□□□□□ -0.04
CPSF3-203ENST00000475482 L3MBTL4Q8NA19 623 aa14.83□□□□□ -0.04
CPSF3-203ENST00000475482 TEX19Q8NA77 164 aa14.83□□□□□ -0.04
CPSF3-203ENST00000475482 FDCSPQ8NFU4 85 aa14.83□□□□□ -0.04
CPSF3-203ENST00000475482 PYCR2Q96C36 320 aa14.83□□□□□ -0.04
CPSF3-203ENST00000475482 OR2A5Q96R48 311 aa14.83□□□□□ -0.04
CPSF3-203ENST00000475482 SPSB2Q99619 263 aa14.83□□□□□ -0.04
CPSF3-203ENST00000475482 SMAD5Q99717 465 aaKnown RBP14.83□□□□□ -0.04
CPSF3-203ENST00000475482 ZFYVE21Q9BQ24 234 aa14.83□□□□□ -0.04
CPSF3-203ENST00000475482 HYKKA2RU49 373 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 VSTM2BA6NLU5 285 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 SDHDO14521 159 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 ULK1O75385 1050 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 ATP5HO75947 161 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 PIM1P11309 404 aaPredicted RBP14.82□□□□□ -0.04
CPSF3-203ENST00000475482 EPHA3P29320 983 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 OTX2P32243 289 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 CD97P48960 835 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 FOXL2P58012 376 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 LAPTM5Q13571 262 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 TSTA3Q13630 321 aaPredicted RBP14.82□□□□□ -0.04
CPSF3-203ENST00000475482 SLC9A5Q14940 896 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 NKG7Q16617 165 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 HIST2H2ACQ16777 129 aaPredicted RBP14.82□□□□□ -0.04
CPSF3-203ENST00000475482 SLC9B1Q4ZJI4 515 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 PAGE2BQ5JRK9 111 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 DCAF10Q5QP82 559 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 PRAMEF13Q5VWM6 474 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 HIST2H2AA3Q6FI13 130 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 LETMD1Q6P1Q0 360 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 LCTLQ6UWM7 567 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 MYLK4Q86YV6 388 aaPredicted RBP14.82□□□□□ -0.04
CPSF3-203ENST00000475482 HPS6Q86YV9 775 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 TTC29Q8NA56 475 aaPredicted RBP14.82□□□□□ -0.04
CPSF3-203ENST00000475482 REPS1Q96D71 796 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 ERP27Q96DN0 273 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 NUDT9Q9BW91 350 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 ACAT2Q9BWD1 397 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 EHD1Q9H4M9 534 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 TNFRSF12AQ9NP84 129 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 MRPS30Q9NP92 439 aaKnown RBP14.82□□□□□ -0.04
CPSF3-203ENST00000475482 P4HTMQ9NXG6 502 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 TAC3Q9UHF0 121 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 ZNF225Q9UK10 706 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 LRRK2Q5S007 2527 aa14.82□□□□□ -0.04
CPSF3-203ENST00000475482 DOPEY2Q9Y3R5 2298 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 IGLV3-12A0A075B6K2 115 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 H0YGG7 62 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 SLC28A1O00337 649 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 FCHO1O14526 889 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 PIP5K1BO14986 540 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 SLC22A2O15244 555 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 HNRNPCL1O60812 293 aaKnown RBP14.81□□□□□ -0.04
CPSF3-203ENST00000475482 CCNDBP1O95273 360 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 IGHEP01854 428 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 PCSK2P16519 638 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 NCF2P19878 526 aaPredicted RBP14.81□□□□□ -0.04
CPSF3-203ENST00000475482 MMP11P24347 488 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 ADSLP30566 484 aaPredicted RBP14.81□□□□□ -0.04
CPSF3-203ENST00000475482 CASP2P42575 452 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 ARF3P61204 181 aaPredicted RBP14.81□□□□□ -0.04
CPSF3-203ENST00000475482 ABATP80404 500 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 CHIT1Q13231 466 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 ZXDCQ2QGD7 858 aaPredicted RBP14.81□□□□□ -0.04
CPSF3-203ENST00000475482 LSM12Q3MHD2 195 aaKnown RBP14.81□□□□□ -0.04
CPSF3-203ENST00000475482 XKR6Q5GH73 641 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 FAM91A1Q658Y4 838 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 PRMT9Q6P2P2 845 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 CLNKQ7Z7G1 428 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 DTWD1Q8N5C7 304 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 FITM2Q8N6M3 262 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 PPFIBP2Q8ND30 876 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.81□□□□□ -0.04
CPSF3-203ENST00000475482 UBE2E3Q969T4 207 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 MIB2Q96AX9 1013 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 TUBGCP3Q96CW5 907 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 PTCD3Q96EY7 689 aaKnown RBP14.81□□□□□ -0.04
CPSF3-203ENST00000475482 PPP1R36Q96LQ0 422 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 C10orf90Q96M02 699 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 FER1L6-AS2Q96M78 137 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 CDK15Q96Q40 435 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 EFCAB11Q9BUY7 163 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 ELOVL6Q9H5J4 265 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 WDR55Q9H6Y2 383 aaPredicted RBP14.81□□□□□ -0.04
CPSF3-203ENST00000475482 SAR1AQ9NR31 198 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 ABCF3Q9NUQ8 709 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 NXT1Q9UKK6 140 aaKnown RBP14.81□□□□□ -0.04
CPSF3-203ENST00000475482 ZNF451Q9Y4E5 1061 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 TIMM22Q9Y584 194 aa14.81□□□□□ -0.04
CPSF3-203ENST00000475482 PRRC2CQ9Y520 2896 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms