RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 ATP5A1P25705 553 aaKnown RBP19.62■□□□□ 0.73
TOP3A-204ENST00000472959 SSR2P43308 183 aa19.62■□□□□ 0.73
TOP3A-204ENST00000472959 RUNX2Q13950 521 aa19.62■□□□□ 0.73
TOP3A-204ENST00000472959 DEFB109BQ30KR1 87 aa19.62■□□□□ 0.73
TOP3A-204ENST00000472959 TUBB8Q3ZCM7 444 aa19.62■□□□□ 0.73
TOP3A-204ENST00000472959 PPP1R32Q7Z5V6 425 aa19.62■□□□□ 0.73
TOP3A-204ENST00000472959 MRGPREQ86SM8 312 aa19.62■□□□□ 0.73
TOP3A-204ENST00000472959 CA13Q8N1Q1 262 aa19.62■□□□□ 0.73
TOP3A-204ENST00000472959 ACOT4Q8N9L9 421 aa19.62■□□□□ 0.73
TOP3A-204ENST00000472959 OR6Y1Q8NGX8 325 aa19.62■□□□□ 0.73
TOP3A-204ENST00000472959 ARL8AQ96BM9 186 aa19.62■□□□□ 0.73
TOP3A-204ENST00000472959 ATP6V1G3Q96LB4 118 aa19.62■□□□□ 0.73
TOP3A-204ENST00000472959 SH3GL2Q99962 352 aa19.62■□□□□ 0.73
TOP3A-204ENST00000472959 LYRM4Q9HD34 91 aa19.62■□□□□ 0.73
TOP3A-204ENST00000472959 FARSBQ9NSD9 589 aaKnown RBP19.62■□□□□ 0.73
TOP3A-204ENST00000472959 MKL2Q9ULH7 1088 aa19.62■□□□□ 0.73
TOP3A-204ENST00000472959 MAN2B2Q9Y2E5 1009 aa19.62■□□□□ 0.73
TOP3A-204ENST00000472959 LAMA5O15230 3695 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 ZFHX4Q86UP3 3567 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 UQCRHLA0A096LP55 91 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 PLPP1O14494 284 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 ETHE1O95571 254 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 UQCRHP07919 91 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 CERS1P27544 350 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 CCR10P46092 362 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 CSTF3Q12996 717 aaKnown RBP19.61■□□□□ 0.73
TOP3A-204ENST00000472959 MINDY4Q4G0A6 757 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 BORAQ6PGQ7 559 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 TMEM151BQ8IW70 566 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 ZCCHC7Q8N3Z6 543 aaKnown RBP19.61■□□□□ 0.73
TOP3A-204ENST00000472959 GBP7Q8N8V2 638 aaPredicted RBP19.61■□□□□ 0.73
TOP3A-204ENST00000472959 PPP1R14CQ8TAE6 165 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 VN1R1Q9GZP7 353 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 LANCL2Q9NS86 450 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 NKIRAS1Q9NYS0 192 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 LHX6Q9UPM6 363 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 TIMM22Q9Y584 194 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 CFAP47Q6ZTR5 3102 aa19.61■□□□□ 0.73
TOP3A-204ENST00000472959 DSPP15924 2871 aaKnown RBP19.61■□□□□ 0.73
TOP3A-204ENST00000472959 SERTM1A2A2V5 107 aa19.6■□□□□ 0.73
TOP3A-204ENST00000472959 RTCAO00442 366 aaKnown RBP19.6■□□□□ 0.73
TOP3A-204ENST00000472959 JRKO75564 520 aa19.6■□□□□ 0.73
TOP3A-204ENST00000472959 UROSP10746 265 aa19.6■□□□□ 0.73
TOP3A-204ENST00000472959 RAB38P57729 211 aa19.6■□□□□ 0.73
TOP3A-204ENST00000472959 TBR1Q16650 682 aa19.6■□□□□ 0.73
TOP3A-204ENST00000472959 ARL13AQ5H913 290 aaPredicted RBP19.6■□□□□ 0.73
TOP3A-204ENST00000472959 TCHHL1Q5QJ38 904 aaPredicted RBP19.6■□□□□ 0.73
TOP3A-204ENST00000472959 MFSD4BQ5TF39 518 aa19.6■□□□□ 0.73
TOP3A-204ENST00000472959 HHATQ5VTY9 493 aa19.6■□□□□ 0.73
TOP3A-204ENST00000472959 ZNF793Q6ZN11 406 aa19.6■□□□□ 0.73
TOP3A-204ENST00000472959 CUZD1Q86UP6 607 aa19.6■□□□□ 0.73
TOP3A-204ENST00000472959 ANKRD42Q8N9B4 389 aa19.6■□□□□ 0.73
TOP3A-204ENST00000472959 APOBEC4Q8WW27 367 aaKnown RBP19.6■□□□□ 0.73
TOP3A-204ENST00000472959 METTL21AQ8WXB1 218 aa19.6■□□□□ 0.73
TOP3A-204ENST00000472959 KCNA7Q96RP8 456 aa19.6■□□□□ 0.73
TOP3A-204ENST00000472959 ACBD3Q9H3P7 528 aa19.6■□□□□ 0.73
TOP3A-204ENST00000472959 DDX31Q9H8H2 851 aaKnown RBP19.6■□□□□ 0.73
TOP3A-204ENST00000472959 P4HTMQ9NXG6 502 aa19.6■□□□□ 0.73
TOP3A-204ENST00000472959 DAPP1Q9UN19 280 aa19.6■□□□□ 0.73
TOP3A-204ENST00000472959 SLC12A4Q9UP95 1085 aa19.6■□□□□ 0.73
TOP3A-204ENST00000472959 HS3ST3B1Q9Y662 390 aa19.6■□□□□ 0.73
TOP3A-204ENST00000472959 WDR91A4D1P6 747 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 ALOX12BO75342 701 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 SERPINE1P05121 402 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 FGF4P08620 206 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 GRK2P25098 689 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 BSGP35613 385 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 RRADP55042 308 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 FOXA1P55317 472 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 LIM2P55344 173 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 ATP1A4Q13733 1029 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 KIRREL2Q6UWL6 708 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 ZCCHC23Q6ZST2 131 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 PAGE2Q7Z2X7 111 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 NUDT13Q86X67 352 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 SHISA5Q8N114 240 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 TMEM102Q8N9M5 508 aaPredicted RBP19.59■□□□□ 0.73
TOP3A-204ENST00000472959 PLPP5Q8NEB5 264 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 FER1L6-AS2Q96M78 137 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 ZNF717Q9BY31 904 aaPredicted RBP19.59■□□□□ 0.73
TOP3A-204ENST00000472959 SHCBP1LQ9BZQ2 653 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 KCMF1Q9P0J7 381 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 VPS29Q9UBQ0 182 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 ADAM29Q9UKF5 820 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 MRPS33Q9Y291 106 aaKnown RBP19.59■□□□□ 0.73
TOP3A-204ENST00000472959 KCNMB2Q9Y691 235 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 SPACA6W5XKT8 324 aa19.59■□□□□ 0.73
TOP3A-204ENST00000472959 A0A1W2PQ72 361 aa19.58■□□□□ 0.72
TOP3A-204ENST00000472959 HMGB1P1B2RPK0 211 aaPredicted RBP19.58■□□□□ 0.72
TOP3A-204ENST00000472959 SOCS6O14544 535 aa19.58■□□□□ 0.72
TOP3A-204ENST00000472959 AZIN1O14977 448 aa19.58■□□□□ 0.72
TOP3A-204ENST00000472959 B4GALT2O60909 372 aa19.58■□□□□ 0.72
TOP3A-204ENST00000472959 SNUPNO95149 360 aaKnown RBP19.58■□□□□ 0.72
TOP3A-204ENST00000472959 C8orf89P0DMQ9 161 aa19.58■□□□□ 0.72
TOP3A-204ENST00000472959 NEFHP12036 1026 aa19.58■□□□□ 0.72
TOP3A-204ENST00000472959 ACPPP15309 386 aa19.58■□□□□ 0.72
TOP3A-204ENST00000472959 RHAGQ02094 409 aa19.58■□□□□ 0.72
TOP3A-204ENST00000472959 SLAMF1Q13291 335 aa19.58■□□□□ 0.72
TOP3A-204ENST00000472959 ABRAXAS2Q15018 415 aa19.58■□□□□ 0.72
TOP3A-204ENST00000472959 CHI3L2Q15782 390 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms