RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 DPH2Q9BQC3 489 aaPredicted RBP8.66□□□□□ -1.02
SMC4-213ENST00000472282 MESP1Q9BRJ9 268 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 NDC1Q9BTX1 674 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 EFCAB11Q9BUY7 163 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 SARGQ9BW04 601 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 C1QTNF3Q9BXJ4 246 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 ERVK-6Q9BXR3 956 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 STMN4Q9H169 189 aaPredicted RBP8.66□□□□□ -1.02
SMC4-213ENST00000472282 EHD1Q9H4M9 534 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 NOL11Q9H8H0 719 aaKnown RBP8.66□□□□□ -1.02
SMC4-213ENST00000472282 IPPKQ9H8X2 491 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 TMBIM4Q9HC24 238 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 ZBTB26Q9HCK0 441 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 CUTCQ9NTM9 273 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 TXLNGQ9NUQ3 528 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 COPG2Q9UBF2 871 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 NDOR1Q9UHB4 597 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 SRPK3Q9UPE1 567 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 AP1M2Q9Y6Q5 423 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 NBASA2RRP1 2371 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 KCNE1BA0A087WTH5 132 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 OR7A17O14581 309 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 DSCR3O14972 297 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 NDUFS4O43181 175 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 H2AFYO75367 372 aaKnown RBP8.65□□□□□ -1.02
SMC4-213ENST00000472282 RGS9O75916 674 aaPredicted RBP8.65□□□□□ -1.02
SMC4-213ENST00000472282 SLC35G6P0C7Q6 338 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 CPA3P15088 417 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 GNLYP22749 145 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 AHRP35869 848 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 FOLR3P41439 243 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 CASP2P42575 452 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 PRKAA2P54646 552 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 ARSFP54793 590 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 CDH13P55290 713 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 DCDP81605 110 aaKnown RBP8.65□□□□□ -1.02
SMC4-213ENST00000472282 TRAF3Q13114 568 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 LAPTM5Q13571 262 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 E2F2Q14209 437 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 TBCCQ15814 346 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 RBBP7Q16576 425 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 MUM1Q2TAK8 710 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 NKAIN1Q4KMZ8 207 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 PAGE2BQ5JRK9 111 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 GRHL2Q6ISB3 625 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 JMJD6Q6NYC1 403 aaPredicted RBP8.65□□□□□ -1.02
SMC4-213ENST00000472282 TMIGD1Q6UXZ0 262 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 TTLL10Q6ZVT0 673 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 MED25Q71SY5 747 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 RAB43Q86YS6 212 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 C10orf107Q8IVU9 208 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 TMEM102Q8N9M5 508 aaPredicted RBP8.65□□□□□ -1.02
SMC4-213ENST00000472282 KCT2Q8NC54 265 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 CAMKVQ8NCB2 501 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 OR52B6Q8NGF0 335 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 PROKR1Q8TCW9 393 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 PPP4R1Q8TF05 950 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 NUDT8Q8WV74 236 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 SLC13A3Q8WWT9 602 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 CCT6BQ92526 530 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 ARL8AQ96BM9 186 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 TLCD1Q96CP7 247 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 TM4SF19Q96DZ7 209 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 CCDC126Q96EE4 140 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 L3HYPDHQ96EM0 354 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 MECRQ9BV79 373 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 ACTR8Q9H981 624 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 VIPAS39Q9H9C1 493 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 ZBTB20Q9HC78 741 aaPredicted RBP8.65□□□□□ -1.02
SMC4-213ENST00000472282 P4HTMQ9NXG6 502 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 IFT80Q9P2H3 777 aaPredicted RBP8.65□□□□□ -1.02
SMC4-213ENST00000472282 ZFP69BQ9UJL9 534 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 PADI2Q9Y2J8 665 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 MRPS2Q9Y399 296 aaKnown RBP8.65□□□□□ -1.02
SMC4-213ENST00000472282 ACTL7BQ9Y614 415 aa8.65□□□□□ -1.02
SMC4-213ENST00000472282 RELNP78509 3460 aa8.65□□□□□ -1.03
SMC4-213ENST00000472282 A0A1B0GTL3 188 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 A0A1B0GX78 115 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 HYKKA2RU49 373 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 PPP6CO00743 305 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 TXNDC9O14530 226 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 SASH3O75995 380 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 CLDN9O95484 217 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 RNF224P0DH78 156 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 PCNAP12004 261 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 IMPDH1P20839 514 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 ALDH3A1P30838 453 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 HNF4AP41235 474 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 ETV4P43268 484 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 OR1D4P47884 311 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 NAGLUP54802 743 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 MAGOHP61326 146 aaKnown RBP8.64□□□□□ -1.03
SMC4-213ENST00000472282 CLCQ05315 142 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 RGS1Q08116 209 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 PCDH1Q08174 1060 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 ESPL1Q14674 2120 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 SSPNQ14714 243 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 HIST2H2ACQ16777 129 aaPredicted RBP8.64□□□□□ -1.03
SMC4-213ENST00000472282 FAM214AQ32MH5 1076 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 DCAF10Q5QP82 559 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms